Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028239.1
Length=16133
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 284 1e-72
>seq1802
Length=132586
Score = 284 bits (314), Expect = 1e-72
Identities = 725/1076 (67%), Gaps = 32/1076 (3%)
Strand=Plus/Minus
Query 11045 TGGCATCGACTACCGTTGATTAAGTGTTTTGATATACCGGATATGATTGATCCAAGTATA 11104
|||||| || || |||| ||||||||||| || || ||| |||| ||||| ||| ||
Sbjct 31317 TGGCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTA 31258
Query 11105 ATATATAGTGATAAGTCCCATTCAATCAACAGATCAGATGTTCTAAAACACATAAGAGAA 11164
|| ||| |||||| ||||||||||| ||||| ||||| | || ||||| ||
Sbjct 31257 ATCTATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAA 31198
Query 11165 AATCCTAATAAGCCAATACCTACAAAAAGAGTGTTAAAAACATTGTTGGAAAAACCAGCG 11224
|||| |||| || || || |||| | || || | || || | | | || ||
Sbjct 31197 TATCCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCA 31138
Query 11225 ACAGTTTGGCCAGAGTTTTTGAAAAGGGTGAATGATCATGGGCTTGATTGGGAAAGTTTA 11284
|||| ||| | ||||||||| ||| ||||||||||| | || |||| | |
Sbjct 31137 ACAGAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTT 31078
Query 11285 GTAATTGGTCTTAAGGCTAAAGAGAGGGAA---TTGAAAGATGCTGGGAGGtttttttCA 11341
|| || || ||| || ||| ||| ||| || ||||| || || |||||| |
Sbjct 31077 GTTATCGGA-TTACGGGGGAAG-GAGCGAAAAATTAAAAGAATA-GGTAGATTTTTTGCT 31021
Query 11342 TTAATGAGCTGGGAGCTGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCAT 11401
| ||| |||| | | || || || |||||| | || |||| | ||||||| ||||
Sbjct 31020 CTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCAT 30963
Query 11402 TTTGTACCATTATTTAAGGGTCTGACTATGGCTGATGACTTACAAACAGTTATTAAGAAG 11461
||||| ||||| ||| ||| |||||||||| |||||| | | || || | ||||||
Sbjct 30962 TTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAG 30903
Query 11462 ATGATAGATGTGTCTTCTGGTCAAGGCACTGAGACATATGAGAATATCACCATTGCAAAT 11521
||| ||||| || ||||||||| || |||||| |||| || ||||| |||
Sbjct 30902 ATGTTAGATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAAT 30843
Query 11522 AACATAGATTATGAGAAATGGAATAATTATCAAAGGTATGAATCTAATCATGCAATATTC 11581
| || ||||||| || ||||| ||| ||||||| ||||| | || || | | |||
Sbjct 30842 CATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTC 30783
Query 11582 ACAGTGATGGGGCAATTTTTAGGGTATCCAAAGTTAATTGCAAGAACTCATGAGTTTTTT 11641
||||| ||||| ||||||||||||||||| || || || | |||| ||||| || ||
Sbjct 30782 ACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTC 30723
Query 11642 GAGAAAAGCCTAGTTTATTATAACCAAAGACCTGACTTAATGAGAG---TAGTAGGGAAT 11698
| || || ||||||| ||| | |||||||| |||||| || ||| || |
Sbjct 30722 CAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGT 30663
Query 11699 GAAGTAA--TAAGCTCCAATTCTAGAAAGGTAGCATGGGAAGGTCAGAAAGGTGGACTGG 11756
|| || ||| || | | ||| | | || ||| | ||||| ||| ||||| |
Sbjct 30662 TTAGAAAACAAAGACCCTA-TGAAGAGGGTTTGC-TGGAATGGTCAAGCAGGAGGACTAG 30605
Query 11757 AGGGATTAAGGCAGAAAGGGTGGAGTGTGGTGAATCTATTAATGATAGAGAGAGAAGTAA 11816
|||| | || || ||||| || ||| | || || || ||| || | ||||||| |
Sbjct 30604 AGGGGCTGAGACAAAAAGGATGAAGTATCGTTTAT-TA-TAAACATTAAAAGAGAAGGTA 30547
Query 11817 AAATAAGAAACACGTTAGTTAAGGTCTTAGCCCAGGGTGATAATCAAACAATAACAACAC 11876
|| | ||| ||| | ||| |||| || || || ||||||||| | || |
Sbjct 30546 AAGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTC 30487
Query 11877 ATTATAAA--ACAGAAACATTTCATCAAGAGAATGAA-TTGATGGA-GCATATAAA-AAA 11931
| |||||| ||| || || |||||| |||||| | |||| | | || ||| ||
Sbjct 30486 AATATAAACTGCAG-AAGATACGATCAAG-CAATGAACTAGATGAATGTATCCAAAGAAT 30429
Query 11932 TATAGTTAGTAATAATAATGCAATCATGGAAAGTATAATAATAGGGACAAGAAAGCTAGG 11991
|||| | | || || ||| ||| ||| | ||| || ||| || | || ||
Sbjct 30428 TATA-TCA--AACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGG 30372
Query 11992 GCTAAGGATAAATGAAGACGAGACAATGCAGTCACCGGATTATATAAACTATGGAAAGGT 12051
| || ||| |||| || || ||| ||||| |||||||| | || ||||| |||||
Sbjct 30371 ATTGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGT 30312
Query 12052 GCCGATTGTGAATGG--AGTTATAAGGGGATTAAATACAAAAAGGTGGTCCAGAGT 12105
|||||| | ||| | || || ||||| ||| ||||||| |||||| ||||
Sbjct 30311 TCCGATTTTTCGTGGGAAAGTA-AAAGGGATGGAAT-CAAAAAGATGGTCC-GAGT 30259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 51502851874848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |