Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028241.1
Length=14478
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 203 3e-48
>seq1802
Length=132586
Score = 203 bits (224), Expect = 3e-48
Identities = 388/566 (69%), Gaps = 32/566 (6%)
Strand=Plus/Minus
Query 9662 AATTGAAAGAAGCCGGACGATTCTTTTCCTTAATGTCCTGGGAATTAAGGGAATATTTCG 9721
|||| |||||| | | |||| ||| | | ||||||||| ||||||| || |||||||
Sbjct 31048 AATTAAAAGAATAGGTA-GATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCG 30990
Query 9722 TTGTAACTGAATTACTGATTAAACAACATTATGTAAAGTTGTTCAAAGGTTTGACCATGG 9781
| |||| ||| |||||||| |||| ||| ||||| || ||||| ||||
Sbjct 30989 TAATAACAATATT--TGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGG 30932
Query 9782 CAGATGATCTCCAAACTGTCATAAAGAAAATGCTTGATACCTCACATGGTCAGGGAACCC 9841
||||||| || | ||||| ||||||| ||| | ||||| || ||||||| ||
Sbjct 30931 CAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAG 30872
Query 9842 GTACATATGATGCCATCACCATTGCCAATAACATAGACTATGAAAAATGGAATAATTATC 9901
| |||||| || || ||||| ||| | || | |||||||| ||||| ||| |||
Sbjct 30871 ATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATC 30812
Query 9902 AGAGAATGGAATCAAACGGTCCTGTATTCAGAGTAATGGGTCAATTCTTGGGATATCCTA 9961
| ||| ||| | ||| |||||| |||| ||| ||||| ||||| || || |||||||
Sbjct 30811 AAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTA 30752
Query 9962 ATTTGATA-CTCAGGACCCATGAGTTTTTTCAGAAAAGTTTAATTTATTATAATCAAAGA 10020
||||||| ||| | |||||||| || || || |||||||||||||| || | |||
Sbjct 30751 ATTTGATCTCTC-GAACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGA 30693
Query 10021 CCTGATTTGATGAGAG----------TAGTTGGGAAAAGTGCTATGAACAGTACTAAACA 10070
|||||| | |||| || | ||| ||||| | | || | ||| |
Sbjct 30692 CCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAA---CAAAGACC----CTATGAA 30640
Query 10071 TATCGTGTGCTGGGAAGGGCAGCTGGGTGGTTTAGAAGGGCTGAGACAAAAGGGGTGGAG 10130
| || |||||| | || || || || |||| |||||||||||||| || || ||
Sbjct 30639 GAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAG 30580
Query 10131 TGTTGTCAATTATTTAATGATTGAACGAGAATCTAAAGTAAGAAACAC----CTTAGTGA 10186
| | || |||| ||| ||| || ||||| |||||| ||| || ||||||
Sbjct 30579 TATCGTTTATTA--TAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACTTAGT-- 30524
Query 10187 AAGTGTTGGCTCAGGGAGACAACCAA 10212
| ||||| || ||||| || |||
Sbjct 30523 --ATCTTGGCGCAAGGAGATAATCAA 30500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46207298951583
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |