Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028246.1
Length=14627
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 241 1e-59
>seq1802
Length=132586
Score = 241 bits (266), Expect = 1e-59
Identities = 564/840 (67%), Gaps = 21/840 (3%)
Strand=Plus/Minus
Query 9711 TTTTTAAAAGAAATTAATGATCACGGTTTGGAGTGGGAAAAACTGGTAATAGGACTAAAA 9770
||||| ||||| | |||||||| ||||| || |||| | || || || ||| ||
Sbjct 31122 TTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGG 31063
Query 9771 GCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCATATGACATG 9830
| || ||| || || | || | | ||||||||||||| | | ||||| | | |
Sbjct 31062 GGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTA 31003
Query 9831 AGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAA 9890
|| ||||| |||||||| || |||||||||| ||| ||| ||| ||||| ||
Sbjct 31002 AGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCG 30945
Query 9891 GGATTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAA 9950
|||||||| ||||| ||||| | ||||| ||| ||||||| ||| | | ||| ||
Sbjct 30944 GGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAAT 30885
Query 9951 GGTCAAGGGCTAACAGATTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAG 10010
||||||||| || | ||| || | |||||| |||||||||| | ||||||| |||
Sbjct 30884 GGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAG 30825
Query 10011 TGGAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTTT 10070
||||| ||| ||||||| ||| | ||| ||| || |||| ||| ||||| || |||
Sbjct 30824 TGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTT 30765
Query 10071 TTAGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTTGAAAATAGTCTAATTTAT 10130
||||| ||| | || || |||| || || ||||| || ||| ||||||||
Sbjct 30764 TTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTAT 30705
Query 10131 TACAATGGCCGACCTGATTTAATGTATGTCAGA-AATAAAGTTGTACACTCCAAAG--GT 10187
||||| |||||||| ||||| || | | || ||| || | |||||
Sbjct 30704 TACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTT-TAGAAAACAAAGACCC 30646
Query 10188 GATG-ACATCGTTTGCTGGGAAGGACAAAAAGGAGGATTAGAGGGTCTAAGACAAAAAGG 10246
||| | | ||||||||| | || ||| ||||||| ||||||| || |||||||||||
Sbjct 30645 TATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGG 30586
Query 10247 ATGGAGTGTCCTTAATTGCCTAATGATTGAGAGAGAATCAAAGATTCGGAACACCCAAAT 10306
||| ||| || || ||| ||| ||| | |||||| || || || || | |
Sbjct 30585 ATGAAGTATCGTTTATT--ATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACT 30528
Query 10307 CGGCTTATTGGCCCAGGGAGACAACCAAGTAATCACAACACATTATAAAGTTGAG-CCAT 10365
| | ||||| || ||||| || ||||| || || || |||||| | || ||
Sbjct 30527 TAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAAGAT 30468
Query 10366 ---ATCAA--AATGACAATGAATTAATCTTCCACATCAATAATATTATATCGAATAATAA 10420
||||| ||||| | | || ||| | ||| | | |||||||| || || ||
Sbjct 30467 ACGATCAAGCAATGA-ACTAGATGAATGT-----ATCCAAAGAATTATATCAAACAACAA 30414
Query 10421 TCGTATAATGGATGCAATAATAGAAGGAACAGAAAAGTTGGGCTTAAAAATAAACATGGA 10480
| |||||| | ||| | ||||||| | | || || ||| || ||
Sbjct 30413 TAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATCAAGA 30354
Query 10481 TGAGACAATTCAGAGTGCAGATTATATTAACTATGGGAAAGTTCCGATATATAGAGGGAA 10540
||| || || || || |||||| | || |||||||| |||||||| | | | |||||
Sbjct 30353 TGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGGGAA 30294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46684058701170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |