Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_031215.1 Length=12291 Score E Sequences producing significant alignments: (Bits) Value seq1802 322 4e-84 >seq1802 Length=132586 Score = 322 bits (356), Expect = 4e-84 Identities = 842/1264 (67%), Gaps = 19/1264 (2%) Strand=Plus/Minus Query 6912 ATTGGCAAGTGACCTCGCATACATAGTGCTGTCTGATCAGTTTAAAAAGAAGAAGACATG 6971 ||| ||||||||| | ||| | || ||| || |||| || | || ||||||| || Sbjct 31480 ATTAGCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATTTG 31421 Query 6972 GATGGTTGATATCAGCAAAGTG-GACAAGAATAATCTCCTATATCCTTTTATTCAACAAA 7030 | ||||| | || | || || |||| | ||| ||||| | ||| |||| Sbjct 31420 GTCAGTTGAAACCAATCTATTGCGAAAAGATCACCCTC-TATATGACTCAATTACTCAAA 31362 Query 7031 ACACCTGGCCGACTCCTGCTTTAAT-AGACGATTTCGGAGATCACTGGCATGAGCTACCT 7089 | || ||||| ||||| | || ||| || || || ||||| |||||| || ||| Sbjct 31361 ATACATGGCCTACTCCATTTCAGATCAGA-GACTTTGGGGATCAATGGCATACTCTTCCT 31303 Query 7090 TTGATCAAGTGTTTTGAAATTCCGGACATGTTTGATCCTTCGACGCTGTATGCAGATAAA 7149 |||| ||||||||||| || || || || | |||||| | ||||| |||||| Sbjct 31302 TTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAA 31243 Query 7150 AGTCATTCCATGAACAAAGATGAGGTTATTGATTTCATG-AAGAAGA-ATCCAGATCGTC 7207 || ||||| || | || | || | || |||| ||||| | |||| || || Sbjct 31242 AGCCATTCAATCACTTAATCAGCAATTCTAGAG--CATGTAAGAAAATATCCGAATATTC 31185 Query 7208 CTATTCCATCAAAAAAGGTATTATATACTCTTCTTATGAAGCCCGCGCGAAATTGGCCAG 7267 | || || ||||| |||||| || | ||| || | | | ||||| | | ||| | Sbjct 31184 CGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAA 31125 Query 7268 CCTTTCTGAAACAAATAGATGAGGAGGGGCTGGATCTCAATGCTCTGATTATCGGGTTGA 7327 ||||| ||||| | | |||| | || | || | | ||| ||||||| || Sbjct 31124 CCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTAC 31065 Query 7328 AAGAGAAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGGGATT 7387 | ||||||| || | || |||| | ||| | ||||| |||| ||||| ||| | | Sbjct 31064 GGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAAT 31005 Query 7388 TGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTTTTCT 7447 | |||||||| || || ||||| ||||| | || || |||||||| || | || | Sbjct 31004 TAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTT 30947 Query 7448 ATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGATGATGGAGAATACTA 7507 || | |||||||| ||||| | | || || | | ||||||| | || | | | | Sbjct 30946 CGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGA 30887 Query 7508 GCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCACCTTGATTACGAAA 7567 ||||| || | |||| |||||| | || |||||| || || || |||| |||| Sbjct 30886 ATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAA 30827 Query 7568 AATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTACGGTGATGGGAAAGT 7627 | |||||||| ||||| ||| || | | | | || || || || || |||||| | | Sbjct 30826 AGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAAT 30767 Query 7628 TTTTGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTTCTTTGAAAAGAGTTTTATCT 7687 |||| || |||||||||||||| | | |||||||| ||||| || |||||| || | Sbjct 30766 TTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTT 30707 Query 7688 ATCACGGAGGCAGAGCAGATTTAATGAAAGTTGTTAATGGATCGATT-GTAAATAAGGAC 7746 || || ||| | ||| |||||| |||| || | ||| || | ||| || ||| Sbjct 30706 ATTACAACAATAGACCTGATCTAATGACAGTT-ATAGAAGCTCGTTTAGAAAACAAAGAC 30648 Query 7747 CCTGAAAGGATGGTTTGTTGGCAGGGTCAAAAAGGTGGGCTAGAAGGACTGAGACAGAAA 7806 ||| | || |||||| ||| | |||||| ||| || ||||| || |||||||| ||| Sbjct 30647 CCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAA 30588 Query 7807 GGGTGGAGTATCCTGAACTTGCTGGTGATAAGAAGAGAAGGTCAAGATAGAAATACAAAA 7866 || || |||||| | | | | || | |||||||||| ||| | |||||| | | Sbjct 30587 GGATGAAGTATCGTTTA--TTATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGA 30530 Query 7867 ATTCGCTGCCTCGCCCAAGGAGATAATCAGGTCATATGCACACAATACAAATTACAAAAG 7926 || | | | || |||||||||||||| || | || || ||||| ||| | || ||| Sbjct 30529 CTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAAG 30470 Query 7927 TATAGGA-CAGATGAGGAGTTACAAGACAATATCAAGAACATTGTCTCAAACAATCAAT- 7984 ||| || || | || || | || |||| | | ||| | |||||||| |||| Sbjct 30469 -ATACGATCAAGCAATGAACTAGATGAATGTATCCAAAGAATTATATCAAACAA-CAATA 30412 Query 7985 ATATATTGAAAAGAATTGAAGAAGGCACCAAGAAGATCGGCTTAAGGATCAACCAAGACG 8044 | ||| ||| | || ||| |||| || || |||| || || || ||||| | Sbjct 30411 AAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATCAAGATG 30352 Query 8045 AAACGATGCAGAGTGCGGACTATCTCAATTATGGTAAAGTTCCCATTTTCCGAGGAAATA 8104 |||| ||| || ||||| ||| | |||||||| || ||||| ||||| || || || Sbjct 30351 AAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGGGAAAG 30292 Query 8105 TGAGAAATTTAGAGATAAAAAGGTGGGCTAGGGTCACATGTGTTACCAACGATCAAGTCC 8164 | | | | || |||||| ||| | | || ||||| | | ||||||||| | | Sbjct 30291 TAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGCATGTATGTCTAACGATCAATTAC 30233 Query 8165 CTAC 8168 |||| Sbjct 30232 CTAC 30229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39212778944820