Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031236.1
Length=11165
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 190 1e-44
>seq1802
Length=132586
Score = 190 bits (210), Expect = 1e-44
Identities = 567/856 (66%), Gaps = 29/856 (3%)
Strand=Plus/Minus
Query 6269 AACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGGGTACTTAGAGAGTATTTTG 6328
|| |||||| | ||| | |||| || | || | || ||| | | ||||| ||||| |
Sbjct 31048 AATTAAAAGAATAGGTA-GATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCG 30990
Query 6329 TCGTAACGGAATATCTTATAAAGATCCATTTCCTCCCTCTTTTTAAGGGACTGACTATGG 6388
| |||| ||||| | || || | ||||| | || | ||| |||| |||||||||
Sbjct 30989 TAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGG 30932
Query 6389 CTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACACCTCCTCGGGTCAAGGGTTAA 6448
| |||||| | | ||| | ||||||||| | || || || ||||||||||||
Sbjct 30931 CAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGGGTTAG 30872
Query 6449 GTGGATACGACAAAATTAGTTATGCTAACCATTTGGATTATGAGAAGTGGAACAATTATC 6508
|||||| || | || | |||||| ||| | ||||||| |||||||||||| |||
Sbjct 30871 ATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATC 30812
Query 6509 AAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGGGACAGTTTCTGGGGTATCCAA 6568
|||| ||| | ||| || || |||| |||||||||||| ||| | |||||||| |
Sbjct 30811 AAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTA 30752
Query 6569 ATCTTATATATCGAACACATGAGTTCTTCCAGAAAAGCATCATTTACTACAATGATAGGC 6628
|| | || | |||||| ||||| |||||||| || | ||||| ||||| |||| |
Sbjct 30751 ATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGAC 30692
Query 6629 CGGATTTGATGGTAG-TAGAGAA---CGGGATGATAGTGAA-TCGCACTGAAGAGAGAGT 6683
| ||| | ||| || || |||| || || | || | | ||| |||| ||
Sbjct 30691 CTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAACAAAGACCCTATGA--AGAGGGT 30634
Query 6684 AGTGTGGAACGGACAAGCTGGGGGATTGGAAGGATTAAGGCAGAAAGGATGGAGTGTTTT 6743
||||| || ||||| || ||| | || || | || || |||||||| ||| | |
Sbjct 30633 TTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGT 30574
Query 6744 GAATGCATTATCGATTGCCAGAGAGGGACGAGATAGAAACACCAAGCTTGCTCTTTTGGC 6803
|| || | | ||| ||||| || || | ||| || | ||| | | |||||
Sbjct 30573 TTAT-TATAAAC-ATTAAAAGAGAAGGTAAAGTTGAAAATACGAGACTTAGTATCTTGGC 30516
Query 6804 TCAAGGGGACAACCAAATTATCTTCACCAACTACAAGATGCAG--GAT----TACAGAGA 6857
||||| || || ||| || ||| || | || || ||||| ||| | || |
Sbjct 30515 GCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAAGATACGATCAAGCAA 30456
Query 6858 TGAAAGAGAGCTTAAGTGTAATCTGGAACGAATCAGGATC-AATAACGATCAGATTATGA 6916
|||| ||| | | |||| | || |||| | ||| || ||| || | || ||||
Sbjct 30455 TGAACTAGA---TGAATGTA---TCCAAAGAATTA-TATCAAACAACAATAAAATAATGA 30403
Query 6917 AGTCCATAGAAAGTGGAA-TAATAAAGCTTGGACTGAAAATCAATCAAGACGAGACAATG 6975
|||||||| |||| |||| | || ||| || ||| |||||||| || || |||
Sbjct 30402 GTAACATAGAAAAAGGAACTAATCGA-CTCGGATTGTTAATTAATCAAGATGAAACCATG 30344
Query 6976 CAATCTGCTGATTTCACCAATTATGGTAAAATACCGATAATCCGAGGAAACATATACCCA 7035
| || || |||| |||||||| || | ||||| | || || || || |
Sbjct 30343 AAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTGGGAAAGTAAAAGGG 30284
Query 7036 TTAGAGACAAAAAGATGGTCTAGGGCTGCTTGTGTGACTAATGATCAGTTACCCAGCCTA 7095
| || ||||||||||||| | | || ||| || |||| ||||| ||||| | ||
Sbjct 30283 ATGGAATCAAAAAGATGGTC-CGAGTAGCATGTATGTCTAACGATCAATTACCTACAATA 30225
Query 7096 GGAAATGTTATGTCTA 7111
| ||| | || ||||
Sbjct 30224 AGTAATATAATCTCTA 30209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35609874898156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |