Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq1802 206 2e-49 >seq1802 Length=132586 Score = 206 bits (228), Expect = 2e-49 Identities = 1100/1718 (64%), Gaps = 67/1718 (4%) Strand=Plus/Minus Query 5927 TATGGGTCATTTAGACACTGGGGTCACCCTTACATAGACTATTTCACAGGGCTAGAAAAA 5986 || || ||||||||||| ||||| || || | | |||||| | ||| || |||| Sbjct 31593 TACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAGGACTCAAAAAG 31534 Query 5987 CTATACGAACAAGTCTCTCTGGATAAAAAGATTGATCTCAAATATGCGGAGTTACTTGCT 6046 || | |||||| || | | |||| |||||||| | ||||||| || | | || Sbjct 31533 TTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGATATGCGCAGGCATTAGCA 31474 Query 6047 AGTGATTTGGCATTCTTAGTAATTAAAGATCAATTTCAAACAAAAAAGTGGTGGCCTGTT 6106 ||||| || ||| | || | || ||||||| | | ||| ||| ||| | ||| Sbjct 31473 AGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATTTGGTCAGTT 31414 Query 6107 GATAAAGAAAAAGTCCCTGAAGATCATCCACTAAAAAAGTATATCATGAACAACACATGG 6166 || | | | | | ||||||| || ||| | | | || | | || |||||| Sbjct 31413 GAAACCAATCTATTGCGAAAAGATCACCCTCTATATGACTCAATTACTCAAAATACATGG 31354 Query 6167 CCGAATA-ATAGCACAATCGTAAATTTCGGAGATCATTGGCATGAGTTGCCTTTAATTAA 6225 || | | || || | || | | || || ||||| |||||| | ||||| | || Sbjct 31353 CCTACTCCATTTCAGA-TCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTGAAAAA 31295 Query 6226 ATGTTTTGATATACCTGATGTTGTGGACCCATCTATTATTTATTCAGATAAAAGTCATTC 6285 |||||||| || || ||||| | || || | | || ||| | |||||||| ||||| Sbjct 31294 GTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTC 31235 Query 6286 CCTCACCAGATCAGAAATAAAAAATTATTTAACCCTTCATCCAAATTCATCGATACCCTC 6345 |||| ||||| ||| | | || ||| |||| ||| |||| || || Sbjct 31234 AATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATCCCGTC 31175 Query 6346 TAAAAAAGTTCTCTCCACACTTTTAGAAA--GCCCAAGCACAAATTGGCCGGAGTTTCTA 6403 || || || || | ||||||| || | || ||| | ||| ||| | Sbjct 31174 AAAGAAGGTACTAG--AGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTTTTG 31117 Query 6404 CAACGAATAAATGATTTTGGGATCTCAATTGAACATTTAGTGATTGGTTTAAAAGAGAAA 6463 || | |||||| ||| | ||| || | || || || ||| | ||| Sbjct 31116 AAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGAAG 31057 Query 6464 GAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCTTTAATGTCTTGGGAGATTAGAGAT 6523 || || | | || | | ||| |||||||| ||| | ||||| ||| | | |||||| Sbjct 31056 GAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGAT 30997 Query 6524 TATTTTGTAATGACAGAATATTTAATTAAAACTCATTTTGTGCCTCTCTTTGACGGATTA 6583 ||||| ||||| ||| |||||| |||||| ||||||||||| | ||| ||||| Sbjct 30996 TATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTG 30939 Query 6584 ACAATGGCTGATGATCTAACAACTGTTATCGGAAAGATTTTGCGAAACACTGAA-GGACA 6642 || ||||| ||||| || | ||||| | ||||| || || || ||| || || Sbjct 30938 ACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTA-GATACTTCGAATGGTCA 30880 Query 6643 AGGAGAAGATGGATATGAAAGTGTCACCTTCGCAGATCATATAGATTACGAAAAATGGAA 6702 ||| ||||||||||||| | | || | || ||||||| |||| ||||| ||||| Sbjct 30879 AGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGAA 30820 Query 6703 CAATCATCAGAGAGGAGAGGCAAATAATCCAACTTTCAAAGTTATGGGACAATTTTTAGG 6762 ||||||||| |||| || || || ||||| ||||| ||| ||||||||||||||||| Sbjct 30819 CAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGG 30760 Query 6763 ATACCCCAATTTAATTCAGAGAACTCATGAAATATTTGAGAAATCATGGATATATTATAA 6822 || || ||||| || |||| |||||| | || |||| | | || | || Sbjct 30759 GTATCCTAATTTGATCTCTCGAACCCATGAATTCTT---CCAATC--GAGTTTAATTTAT 30705 Query 6823 TCGAAGGGGAGACTTATTGGGCATCGACGATAATGACAACCT--TTT---CAATAAAGGG 6877 | || |||| | | | ||| | || | || || ||| || |||| Sbjct 30704 TACAACAATAGACCTGAT--CTAATGACAGTTAT-AGAAGCTCGTTTAGAAAACAAAGAC 30648 Query 6878 C---AACACAGAGTTTGTTGGAATGGGCAAGCCGGCGGACTTGAAGGACTCAGGCAAAAA 6934 | | || ||||| |||||||| ||||| || ||||| || || || || |||||| Sbjct 30647 CCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAA 30588 Query 6935 GGGTGGAGTATAGTAAATCTCTTAATTCTTAAACGGGAGAGCAGAACTGTTAATAC-CGA 6993 || || ||||| || | | ||| ||||| | || | | | || ||||| || Sbjct 30587 GGATGAAGTATCGT--TTATTATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGA 30530 Query 6994 CATTAAGGTCTTAGCGCAAGGAGATAACCAAGTAATTTGCTCTCGATACAAACTGAGAAA 7053 | ||| |||| |||||||||||||| ||||| | || ||| ||| |||||| || Sbjct 30529 C-TTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATAAACTGCAGAA 30471 Query 7054 AAGTCGAAATCCAGACCAATTA--TATAACAACCT---CATGGA--TATTAGTAAGAACA 7106 | || ||| || |||| | || | || | || || ||| || |||| Sbjct 30470 GATACG--ATCAAG--CAATGAACTAGATGAATGTATCCAAAGAATTATATCAAACAACA 30415 Query 7107 ATAAAGCTCTAATGGATAGAATTGCGGAAGGAACAGGGAAATTAGGACTAATTATTAATC 7166 ||||| ||||| || || | ||||||| | | ||| | | ||||||| Sbjct 30414 ATAAA---ATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTAATC 30358 Query 7167 ACGATGAGACCATGAAAAGCACGGAATTTCTGAATTATGGAAA--AACCTGTGTCTTTAG 7224 | ||||| |||||||| |||| | | |||||||||| || || | | | | Sbjct 30357 AAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTCGTG 30298 Query 7225 GGGTAATATTAGGAATCTGGAAACAAAGAGATGGTCTCGGGTAACTTGTGTAACAAATGA 7284 || | || ||| | ||||| |||| |||||||| || ||| | ||| | | || || Sbjct 30297 GGAAAGTAAAAGGGA--TGGAATCAAAAAGATGGTC-CGAGTAGCATGTATGTCTAACGA 30241 Query 7285 TCAATTACCGACGATGGCTAATGTCTTATCAA---CAACTTCCAGCAATGCACTGACTGT 7341 ||||||||| || || |||| | | || | | |||| || ||| | |||| Sbjct 30240 TCAATTACCTACAATAAGTAATATAATCTCTATGGTATCTTC---TAACGCATTATCTGT 30184 Query 7342 CTCTCATTTTTCTGACTCTCCTATAAATTCTATTATTTTATATAA-CTTCTATGGACATT 7400 || ||||| || |||||| | |||| ||||| ||||| ||||| ||| ||| Sbjct 30183 AGGGCACTTTTCAGAATCTCCTTTGGATTCAATTATCCATTATAATTTTCTA-GGAAATT 30125 Query 7401 T--TGTTCGAATTATTTGTGAAAAGCACAATCCAGCAATCAGAG--GCCCCTTACATTCA 7456 | | || ||| | || || || || |||||||| | || || || ||||| Sbjct 30124 TAGTTTTAGAAGTCTT--AGATCTTCATAACCCAGCAATTAAAGCAGCTCCGACAATTCA 30067 Query 7457 ATCCTAAAAATTTCAGAGATTAAGTATATGTATGATCTTTACTACTTGATATCTTCT-TT 7515 | || || | | | || | | | ||| | || | || | | | || Sbjct 30066 CTTGACCCAACTTGA-ACAACAAAACTTTCT-CAATCGAAAATA-TAGAATTTTAGTATT 30010 Query 7516 ATATTTGGATCCCTCTATTGGTGGTGTTTCCGGTATGTCTTTAACAAGATTCTTAATCAG 7575 |||||| ||||||||| | || || | | ||| ||||| |||| | || |||||||| Sbjct 30009 ATATTTAGATCCCTCTTTGGGCGGCATCTGCGGAATGTCACTAACTCGTTTTTTAATCAG 29950 Query 7576 AGTCTTCCCCGATCCAATCACTGAAAGTTTAACATTTT 7613 || || || ||||| | |||||||||||| |||||| Sbjct 29949 AGCATTTCCTGATCCTGTAACTGAAAGTTTATCATTTT 29912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36812976071820