Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_031268.1 Length=8683 Score E Sequences producing significant alignments: (Bits) Value seq1802 149 3e-32 >seq1802 Length=132586 Score = 149 bits (164), Expect = 3e-32 Identities = 371/554 (67%), Gaps = 21/554 (4%) Strand=Plus/Minus Query 3620 CTTTCTCCAAGAAGTAAATGACCATGGTCTTCCCAAGGATAGTCTCACTATTGGATTAAA 3679 |||| | |||| || ||||| |||||| | | ||| ||| ||| |||||| Sbjct 31123 CTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACG 31064 Query 3680 GGGCAAGGAGCGAGAG-TTAAAAGACGTGGGAAGATTTTTCTCTCTGATGACCTGGGATC 3738 ||| ||||||||| | |||||||| | || |||||||| |||| ||| ||||| | Sbjct 31063 GGGGAAGGAGCGAAAAATTAAAAGAA-TAGGTAGATTTTTTGCTCTTATGTCCTGGAAAT 31005 Query 3739 TGAGAGAGTATTTTGTATCCACTGAGTACCTCATTAAGATGTATTATGTTCCCTTGTTTG 3798 | ||||| ||||| ||| || | || | ||||| || ||| ||| || |||||| Sbjct 31004 TAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTT 30947 Query 3799 AAGGACTCACCATGGCAGATGATCTAAAATCTGTAACACGAAAGATACTGGAGTGTACCA 3858 ||| | || ||||||||||| || || ||||| | ||||| | || | | | Sbjct 30946 CGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGA 30887 Query 3859 CTGGTCACGG-TCAGATCGGTTACAAGGTAGTCAGCTTTGCTAATCACTTAGACTATGAG 3917 |||||| || | |||| | | || || | | |||||||||| | | ||||| Sbjct 30886 ATGGTCAAGGGTTAGATGGATATGAATATA-TAACAATTGCTAATCATATTAATTATGAA 30828 Query 3918 AAATGGAACAATCATCAGAG-GAAAAAGTCAACCTTCCCCGTCTTCAAGGTTATGGGTCA 3976 || |||||||||||||| || || ||| ||| | || || |||| || ||||| || Sbjct 30827 AAGTGGAACAATCATCAAAGAGATGAAGCGAACAAT-CCTGTTTTCACAGTCATGGGACA 30769 Query 3977 GTTCCTTGGGATGCCAAACCTATTCGCTCAAACTCATGATTTCTTCGAACAGAGTTTTGT 4036 || | ||| || || | || ||| ||| ||||| |||||| || |||||| | Sbjct 30768 ATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAAT 30709 Query 4037 TTATTATGGTGAACGTCCTGATCTTATGACTGTTCAAGGAGGAAAGATCGTGAACAATAC 4096 |||||| | | |||||||| ||||| ||| || ||| |||| | || || Sbjct 30708 TTATTACAACAATAGACCTGATCTAATGACAGTTATAG-----AAGCTCGTTTAGAAAAC 30654 Query 4097 --AGAACATAT------TGTATGTTGGAACGGTCAACTGGGCGGACTTGAAGGACTACGA 4148 ||| | ||| || || ||||| |||||| || ||||| || || || || Sbjct 30653 AAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGA 30594 Query 4149 CAAAAGGGATGGAG 4162 ||||| ||||| || Sbjct 30593 CAAAAAGGATGAAG 30580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27668127257108