Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031301.1
Length=11103
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 325 3e-85
>seq1802
Length=132586
Score = 325 bits (360), Expect = 3e-85
Identities = 884/1327 (67%), Gaps = 57/1327 (4%)
Strand=Plus/Minus
Query 5753 GTAGTGTATGGATCATTTCGACATTGGGGACATCCATTTATTGATTATCTACTAGGATTG 5812
|| || || ||||||||| |||||||||| ||||| ||| |||| ||||||| |||| |
Sbjct 31599 GTTGTTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAGGACTC 31540
Query 5813 GAAGCACTTCATACACAAGTACATCT---ACCAAAACGTATAGATGAAAATTATGCCAAA 5869
|| | ||| |||| ||| || | |||||| || ||| || ||||| |
Sbjct 31539 AAAAAGTTACATGAACAA--ACAACTTTAAAGAAAACG-ATTGATCGAAGATATGCGCAG 31483
Query 5870 TTACTAGGAAGTGATCTTGCATATTTGGTATTAAAGAAGAAATTTACCGAAGAAAAGAAA 5929
| ||| |||||| | ||| || | || || ||||| |||| | || | ||||
Sbjct 31482 GCATTAGCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAAAAAGAAGATT 31423
Query 5930 TGGTATGTAGATCTAACCAAAATA----GAACAAAATCATCCTCTATATAAA-CA--TAT 5982
|||| || || |||||| || ||| || |||| ||||||||| | || ||
Sbjct 31422 TGGTCAGTTGA---AACCAATCTATTGCGAA-AAGATCACCCTCTATATGACTCAATTAC 31367
Query 5983 TCAAGAGAATACATGGCCAACTCCAAAACAAATTGAGGACTTTGGAGATAAATGGAATGA 6042
|||| ||||||||||| |||||| || || |||||||| ||| ||||| ||
Sbjct 31366 TCAA---AATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATAC 31310
Query 6043 GTTGCCTTTAACAAAATGTTTTGATATCCCTGATATAATTGATCCCAGTTTACTTTATTC 6102
| ||||| | ||| |||||||| ||||| ||| | || ||||| |||||| | ||| |
Sbjct 31309 TCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGC 31250
Query 6103 AGATAAGAGTCACTCTATGAATAGGGATGAAGTTATTAATCATGTTTCAAGGTATCCAAA 6162
||||| || || || || | | | | || | | ||||| || ||||| ||
Sbjct 31249 TGATAAAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAA 31190
Query 6163 TGTCCCTATTCCAACAAAAAAGGTCTTAGATACATTACTACATACTAAAAGTACCAATTG 6222
| | || || || |||| ||||| |||| || || | | | | || | ||
Sbjct 31189 TATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATG 31130
Query 6223 GCCTGTGTTTTTACAAGAAATTAACGATCATGGATT--ACCAAGAAATTCTAAAATTATT 6280
| ||||| |||| | || |||||||| || ||| ||| ||| ||||
Sbjct 31129 GAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCT--TGTTATC 31072
Query 6281 GGCTTGAAGGGAAAGGAACGTGAAGTTAAGAAAAAAGGTCGTTTCTTTTCTCTAATGTCA 6340
|| || ||| ||||| || || |||| | || |||| | || ||| |||| |||||
Sbjct 31071 GGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCC 31012
Query 6341 TGGATGTTGCGAGAATATTTTGTGATAACAGAATATTTAATCAAGGAGAATTACGTTCCT 6400
|||| || |||| ||||| || ||||| ||||||| || || | | ||| || ||
Sbjct 31011 TGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCA 30954
Query 6401 CTGTTTAGTGGATTGACAATGGCTGATGATTTGACAACTGTCATATCAAAATTGTTAGAT 6460
||||| |||||||| ||||| ||||| | | ||||| || || ||||||||
Sbjct 30953 TTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGAT 30894
Query 6461 A---GGA---GTCAGGGACAAGGTGGTAAAGATTACACTAATATTTGTATCGCAAATCAT 6514
| || |||| || || ||| | || || | ||| | || || ||||||
Sbjct 30893 ACTTCGAATGGTCAAGGGTTAGATGGATATGAATATA-TAACA-----ATTGCTAATCAT 30840
Query 6515 ATTGACTATGAGAAATGGAACAACCATCAAAGAAAAGCTGCAACTGATCCAGTTTTCAAG 6574
||| | ||||| || |||||||| ||||||||| | | || | |||| |||||||
Sbjct 30839 ATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACA 30780
Query 6575 GTCATGGGAGAGTTCTTAGGATATCCCAACTTATTCACAAGAACTCACGAATTCTTTCAA 6634
||||||||| | || ||||| ||||| || || || | |||| || |||||||| |||
Sbjct 30779 GTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAA 30720
Query 6635 GAAAGTCTAATTTACTACAATGGACGACCAGATTTGATGCGTGTCAACAAAGACAGCTT- 6693
||| ||||||| ||||| |||| ||| | ||| || | ||| | ||
Sbjct 30719 TCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTA 30660
Query 6694 ---AACAAATGCAACAAATCAA-ATAGTATGTTGGGAAGGTCAAGAAGGTGGATTAGAAG 6749
|||||| | | || || | || || ||| | ||||||| ||| ||| |||| |
Sbjct 30659 GAAAACAAA--GACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGG 30602
Query 6750 GATTGAGACAAAAGGGATGGACAACAGTAGGATTATTGATGATAAGACGAGAGGCTAGAG 6809
| |||||||||| ||||| | | || |||| | | || | | |||| | || ||
Sbjct 30601 GGCTGAGACAAAAAGGATGAAGTATCGT-TTATTA-TAAACATTAAAAGAGAAGGTAAAG 30544
Query 6810 TTCGAAACACAACGGTCAAAATTTTAGCACAAGGAGATAATCAAGTGATTTGCACTCAAT 6869
|| ||| || | | | || || || ||||||||||||||||| | || |||||||
Sbjct 30543 TTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAAT 30484
Query 6870 ACAAA-TTAAGACCATACCAAAATGAGCAA-GAGTTAGGTGGAAATTTAC-AAGA--TAT 6924
| ||| | ||| |||| | | ||||| || ||| || | | | | |||| |||
Sbjct 30483 ATAAACTGCAGAAGATACGATCA--AGCAATGAACTAGATGAATGTATCCAAAGAATTAT 30426
Query 6925 CTGGTATAATAATCATTCCATTATGAATGCAATACAGAATGGAACCAATAAACTAGGCTT 6984
| | || ||| | || |||| | ||| | || ||||| ||| ||| || ||
Sbjct 30425 ATCAAACAACAATAA---AATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATT 30369
Query 6985 AATTATTAATGAGGATGAAACTATACAATCAGCTGATTATTTAAATTATGGAAAGATACC 7044
| |||||| | |||||||| || | ||||| |||||||| |||||||| ||| | ||
Sbjct 30368 GTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCC 30309
Query 7045 AGTTTTT 7051
|||||
Sbjct 30308 GATTTTT 30302
Score = 102 bits (112), Expect = 6e-18
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 7316 TATAAAATCTTATCATTGTATTTAGATCCTTCATTGGGTGGTGCTTGTGGAACATCATTA 7375
|||| ||| ||| ||| ||||||||||| || ||||| || || |||| ||| ||
Sbjct 30026 TATAGAATTTTAGTATTATATTTAGATCCCTCTTTGGGCGGCATCTGCGGAATGTCACTA 29967
Query 7376 ACAAGATTTTTGACCAGAGCATTTCCTGATCCTGTTACAGAGAGTTTATCATTCTGGAAA 7435
|| | ||||| | ||||||||||||||||||||| || || ||||||||||| ||| ||
Sbjct 29966 ACTCGTTTTTTAATCAGAGCATTTCCTGATCCTGTAACTGAAAGTTTATCATTTTGGCAA 29907
Query 7436 G 7436
|
Sbjct 29906 G 29906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35411491193988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |