Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031305.1
Length=10833
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 98.7 7e-17
>seq1802
Length=132586
Score = 98.7 bits (108), Expect = 7e-17
Identities = 493/772 (64%), Gaps = 25/772 (3%)
Strand=Plus/Minus
Query 5741 GATTTCGGAGACCACTGGCACGAACTTCCACTCACCAAGTGTTTTGAAATCCCAGATGTG 5800
|| || || || || ||||| ||||| | | ||||||||||| ||||| ||||||
Sbjct 31332 GACTTTGGGGATCAATGGCATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTG 31273
Query 5801 ATTGATCCAAGCTTACTTTATTCAGATAAAAGCCACTCCCTACCCCGGGCAGAGGTCATC 5860
|| ||||| || ||| | ||| | ||||||||||| || | | ||| | |
Sbjct 31272 ATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTA 31213
Query 5861 CAATTTGTCAAAAGTGGGAAGAAGGGCCCCATTCCTTCTCTGAAGGTTTTGGACACTCTC 5920
| ||| | || ||| || || || || |||||| | || ||| |
Sbjct 31212 GAGCATGTAAGAAAATATCCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTT 31153
Query 5921 CTTAAGACCTCTGCCACAAACTGGCCAGAGTTTCTTCAAAGAG-TGAATGATGACGGGAT 5979
| || | | || ||| | ||| | ||| || |||||| | |||||| | || |
Sbjct 31152 ATCAACAGTCCCGCAACAGAATGGAAAACCTTT-TTGAAAGAGGTCAATGATCATGGTTT 31094
Query 5980 A--CCTAGAGATCAGCTGGTTATCGGACTGAAAGGGAAGGAACGGGAGTTGAAGAAAAAC 6037
| || || || | || ||||||||| | |||||||| || | | || | ||
Sbjct 31093 AGACCCGGA-AT-ATCTTGTTATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATA 31036
Query 6038 GGGCGCTTCTTCTCATTGATGTCATGGATGTTGCGAGAATATTTCGTGGTCACTGAGTAC 6097
|| | || || | | ||||| |||| || |||| |||||||| | || | ||
Sbjct 31035 GGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATAT 30978
Query 6098 CTTATCAAGCTTCACTATGTTCCCCTTTTCTCAGGCCTGACTATGGCGGATGATCTAACC 6157
| || || | || | ||| || | || || || |||||||||| ||||| || |
Sbjct 30977 TTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAAT 30918
Query 6158 ACAGTCATCACCAAATTATTGGACCGGACCCAAGGACAGGGAGGTACATCG-TATGAAAA 6216
|| || | | || | || || | | || || || | || || | |||||| |
Sbjct 30917 ACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGG-GTTAGATGGATATGAATA 30859
Query 6217 TATCTGCATCGCCAATCACATTGATTATGAGAAATGGAACAATCATCAACGTCAGGAGGC 6276
||| || || ||||| ||| ||||||| || ||||||||||||||| | | || ||
Sbjct 30858 TATAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGC 30799
Query 6277 CACTGCGCCAGTGTTCAGGGTGATGGGACAATTCCTTGGATATCCAAACCTCATTGCGAG 6336
| || || |||| || ||||||||||| | || ||||| || | || | |
Sbjct 30798 GAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCG 30739
Query 6337 GACCCATGAGTTCTTTCAACAAAGCTTAATATACTACAATGGTAGGCCCGATCTCATGAT 6396
|||||||| ||||| ||| || ||||| || ||||| ||| || ||||| ||||
Sbjct 30738 AACCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGAC 30679
Query 6397 TG-TGTCCAAGGATTCTCTT--------AAGTCCCGTGGCCAACATTTGGTTTGTTGGGA 6447
| | | ||| || || ||| ||| | || | |||||| ||| |
Sbjct 30678 AGTTATAGAAG--CTCGTTTAGAAAACAAAGACCCTATG--AAGA--GGGTTTGCTGGAA 30625
Query 6448 GGGCCAGGCAGGCGGACTGGAAGGTTTGCGACAAAAAGGATGGAGTGTCCTT 6499
|| || ||||| ||||| || || || ||||||||||||| ||| || ||
Sbjct 30624 TGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGTATCGTT 30573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 34547562159708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |