Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031690.1
Length=11308
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 237 1e-58
>seq1802
Length=132586
Score = 237 bits (262), Expect = 1e-58
Identities = 1088/1693 (64%), Gaps = 52/1693 (3%)
Strand=Plus/Plus
Query 3721 TTCAGTGACAGGATCTGGAAAGCCTCTTATTAGGAATCGTGTTAGAGATGTTCCTGAGAT 3780
|||||| |||||||| ||||| |||| |||| || || ||||| || |||| ||||
Sbjct 29925 TTCAGTTACAGGATCAGGAAATGCTCTGATTAAAAAACGAGTTAGTGACATTCCGCAGAT 29984
Query 3781 TCCGCCAAGAGATGGATCCAAATACAATGCCAAGCATTTGTATT--CGATGGA------T 3832
||||| | ||| ||||| ||||| ||| | || | | |||| |||| || |
Sbjct 29985 GCCGCCCAAAGAGGGATCTAAATATAATACTAAAATTCTATATTTTCGATTGAGAAAGTT 30044
Query 3833 CTGTTAA--AATTAGGACCTAATG--TTGTTCGGGAGATAGGACCCTTGATGGCTGGATT 3888
|||| || | || | | || |||| |||| | | || || ||||| ||
Sbjct 30045 TTGTTGTTCAAGTTGGGTCAAGTGAATTGTC--GGAGCTG----CTTTAATTGCTGGGTT 30098
Query 3889 ATGTAATTCTAAGAGATTTCGGCAGAAGTTGCCCATAAAATTGTAGTGTGCCATTGGTTC 3948
||| | ||||||| | | || || || | |||||| || || |||| ||
Sbjct 30099 ATGAAGATCTAAGACTTCTAAAACTAAATTTCCTAGAAAATTATAATGGATAATTGAATC 30158
Query 3949 CAAAGGTGAGTCCGAGAAGTGGGCAACTGTGAGTGCATTGGATCCGACAGTGGAGAGAAT 4008
|||||| || || || ||||| | || | | ||| || || || | |||| ||
Sbjct 30159 CAAAGGAGATTCTGAAAAGTGCCCTACAGATAATGCGTTAGAAGATACCATAGAGATTAT 30218
Query 4009 GTTTGCTAGCGTTGGCAATTGGTCATTGGTTACACAAGTTATCCGAGACCAACGTTTGCT 4068
|| || || || ||||| || || | | ||| | || || ||||| | |||
Sbjct 30219 ATTACTTATTGTAGGTAATTGATCGTTAGACATACATGCTACTCG-GACCATCTTTTTGA 30277
Query 4069 TTCTAGACACTGAAAATTCCCTCGGAACACAGGAACCTTCCCATA-TACAAGGTATTCAG 4127
||| | | | | ||||| || || | |||||||||||||| | ||| || || |
Sbjct 30278 TTCCATCCCTTTTACTTTCCCACGAAAAATCGGAACCTTCCCATAATTCAAA-TAATCCG 30336
Query 4128 CTGATTGAAGAGTCTCATCCCGATTGATAATCAGTCCCAATTTCAAGGCTCCTTGCTCTA 4187
|||| | | || ||||| |||| || | || ||| | | | ||||| ||||
Sbjct 30337 CTGACTTCATGGTTTCATCTTGATTAATTAACAATCCGAGTCGATTAGTTCCTTTTTCTA 30396
Query 4188 TATGGTGGATCAATTTGTTGTTGTTTTCCCAAATTCGTTCTAAGGACTGAACCAGTTCTT 4247
| | || | ||| ||||||||| ||||| || | | | | | ||||| |
Sbjct 30397 TGTTACTCATTATTTTATTGTTGTTTGATATAATTCTTTGGATACATTCATCTAGTTCAT 30456
Query 4248 CGTGATTCCT-GTATTTT-TGCACTCGATAATTTGTGCAGACCACCTGATTGTCCCCTTG 4305
|| || | |||| || |||| | ||| | || ||||| || ||||| || |||||
Sbjct 30457 --TGCTTGATCGTATCTTCTGCAGTTTATATTGAGTACAGACAACTTGATTATCTCCTTG 30514
Query 4306 AGCCAGAACTTTAACAAATGTATTGTTGCTTTTGGATGCTCTGTTGATGGCGAGAAGGTT 4365
|||| | ||| ||||| | ||| | |||| || ||| | || |
Sbjct 30515 CGCCAAGATACTAAGTCTCGTATTTTCAACTTTACCTTCTCTTTTAATGTTTATAA--TA 30572
Query 4366 TACAATACTCCATCCCTTTTGGCGCAATCCCTCTAATCCCCCCAATTGACCTTGCCAGCA 4425
|| ||||| ||||| ||||| | || ||||||| ||| || |||||| | ||||||
Sbjct 30573 AACGATACTTCATCCTTTTTGTCTCAGCCCCTCTAGTCCTCCTGCTTGACCATTCCAGCA 30632
Query 4426 ATACAGTTGTCCCGG----TTTATTGACGATTCTTCCATC-ATGACAGCGCAGTTGATCA 4480
| || | || | ||| || | | | | || || || | || | |||||
Sbjct 30633 A-ACCCTCTTCATAGGGTCTTTGTTTTCTAAACGAGCTTCTATAACTGT-CATTAGATCA 30690
Query 4481 GGTCTATCCAGGTAATATATCAGTGATTTTTCAAAGAATTCATGAGTTCGAGATATTAGT 4540
||||||| |||||| || | || ||||||||||| |||||||| || |
Sbjct 30691 GGTCTATTGTTGTAATAAATTAAACTCGATTGGAAGAATTCATGGGTTCGAGAGATCAAA 30750
Query 4541 TTTGGATACCCAAGAAACTTTCCCATCACATCAAATACAGGATTATTGGCTTTGGCTCGT 4600
|| |||||||| | ||| | |||||| || || |||||||| || |||| ||| |
Sbjct 30751 TTAGGATACCCTAAAAATTGTCCCATGACTGTGAAAACAGGATTGTTCGCTTCATCTCTT 30810
Query 4601 TGATGGTTATTCCATTTGCTATAATCAAAGTGATTGGCGATACAGATGTTCTCGTACCCT 4660
||||| || ||||| || ||||| || ||||| || || || | || || ||
Sbjct 30811 TGATGATTGTTCCACTTTTCATAATTAATATGATTAGCAATTGTTATATATTCATATCCA 30870
Query 4661 TCACTTCCTTGACCTGAAGTTGTATCCATCATTTTCTTTATGACGGTAGTCATATCATCT 4720
|| |||||||| | ||||| | ||| ||||||| || ||| | | ||||||
Sbjct 30871 TCTAACCCTTGACCATTCGAAGTATCTAACATCTTCTTTAATACAGTATTAAGGTCATCT 30930
Query 4721 GCCATAGTTAGTCCTTTAAACAATGGAACAAAGTGAGTCTTGATTAGGTGTTCTGTTATT 4780
|||||||| | ||| ||||||||| ||||| || || || | | | |||||||
Sbjct 30931 GCCATAGTCAATCCCGAAAACAATGGCACAAAATGCACTTTAATCAAATAT--TGTTATT 30988
Query 4781 ACAAAATACTCTCGTAAAGCCCAGGTCAATAGAGCATAAAATCTTCCTCCAATCTTGATC 4840
|| ||||| |||| ||| ||||| || |||||| ||||||| ||| | || ||
Sbjct 30989 ACGAAATAATCTCTTAATTTCCAGGACATAAGAGCAAAAAATCTACCTATTCTTTTAATT 31048
Query 4841 TCTCGCTCTTTTCCTTTAAGTCCTATGATGAGATCCTCAAGAGTTAGTCCATTGTCATTG 4900
| |||||| || || | ||| || | |||| || | || |||| ||||||
Sbjct 31049 TTTCGCTCCTTCCCCCGTAATCCGATAACAAGATATTCCGGGTCTAAACCATGATCATTG 31108
Query 4901 ACTTCTTGCAGGAACTTTTTCCACTCCGTTGCAGGTTTTTGGAGAAATGATTCCAGAACT 4960
|| |||| || || ||||||| || ||||| || | | || ||| | || || ||
Sbjct 31109 ACCTCTTTCAAAAAGGTTTTCCATTCTGTTGCGGGACTGTTGATAAAAGTCTCTAGTACC 31168
Query 4961 TTATTTGTTGGGATTGG-GTCATGGGAACGTGTCAGA-ATGTGTCTATAGACCT-CAGAG 5017
|| |||| ||||| || | | ||| | || | ||| || |||| | | ||
Sbjct 31169 TTCTTTGACGGGATCGGAATATTCGGATATTTTCTTACATG---CTCTAGAATTGCTGAT 31225
Query 5018 TATTGCATAGAATGGCTCTTGTCACTATAGATAACGGATGGATCAATGACATCGGGAATC 5077
|| || |||||||| || ||| |||||| | ||||| || |||||||| |||
Sbjct 31226 TAAGTGATTGAATGGCTTTTATCAGCATAGATTAAACTAGGATCGATCACATCGGGGATC 31285
Query 5078 TCCATACATTTTTGAAGCGGTAATCTATGCCAGTTGTCTCCAAAATCGATAATCTTCTTT 5137
|| | ||| |||| | || | ||||||| | || ||||| || | |||| |
Sbjct 31286 TCAAAACACTTTTTCAAAGGAAGAGTATGCCATTGATCCCCAAAGTCTCTGATCTGAAAT 31345
Query 5138 GGTGTTGGCCACG--TTTTGTCTCGGACATGTC-GATAAAGGG-GATGTTTCCGATCAAG 5193
|| || ||||| | ||||| | | ||| ||| |||| ||| ||| || |||
Sbjct 31346 GGAGTAGGCCATGTATTTTGAGTAATTGA-GTCATATAGAGGGTGATCTTTTCG--CAA- 31401
Query 5194 TTGGTCTATGTCCACAAACCACTTTTTCTTCTCCTTGAATTCCTTTTGGAGAACCATAAA 5253
| | | | || || |||| | ||||| | | ||||| || | | || |||
Sbjct 31402 TAGATTGGTTTCAACTGACCAAATCTTCTTTTTGTCGAATTGATTCTTCAACACAATATG 31461
Query 5254 GGCTAAGTCACTGGCGAGTGCATTGGCGTA-CTTCTCGTCAATCGTTTTTGGCATATTTA 5312
||||||||||| || | ||| | || || |||| ||||||||||| | | ||
Sbjct 31462 TGCTAAGTCACTTGCTAATGCCTGCGCATATCTTC-GATCAATCGTTTTCTTTAAAGTTG 31520
Query 5313 CCTGAGCCTCTAGATTTCTTAGGCCTTCCTGATAATCCAGATAAGGATGGCCCCAATGTC 5372
|| | | || ||| | || |||| |||| || ||| | ||||| ||||||||||
Sbjct 31521 TTTGTTCATGTAACTTTTTGAGTCCTTGTAGATAGTCAAGAAACGGATGCCCCCAATGTC 31580
Query 5373 TGAAGGACCCATA 5385
| || || || ||
Sbjct 31581 TAAATGATCCGTA 31593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36067437312608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |