Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031691.1
Length=11238
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 351 7e-93
>seq1802
Length=132586
Score = 351 bits (388), Expect = 7e-93
Identities = 711/1043 (68%), Gaps = 32/1043 (3%)
Strand=Plus/Plus
Query 3838 TTTGATCGCAGGGTTATGTCGATCCAATAAATTGGTTACAAAATTGCCAAGGAAGTTATA 3897
||| || || |||||||| |||| || | | || ||||| || || || |||||
Sbjct 30084 TTTAATTGCTGGGTTATGAAGATCTAAGACTTCTAAAACTAAATTTCCTAGAAAATTATA 30143
Query 3898 ATGGATCATCGAATTGATAGGACTTTCTGAATAATGCGATACTGTCAATGCATTGGAAGA 3957
|||||| || |||| | |||| ||||||| | ||| ||| | ||||| || |||||
Sbjct 30144 ATGGATAATTGAATCCAAAGGAGATTCTGAAAAGTGCCCTACAGATAATGCGTTAGAAGA 30203
Query 3958 TACCGTGGACAATATGTTCCCTAATCCGGGCAATTGATCATTGGATACACATGTAACTCG 4017
|||| | || | ||| || | || | || |||||||| || || | ||||| |||||
Sbjct 30204 TACCATAGAGATTATATTACTTATTGTAGGTAATTGATCGTTAGACATACATGCTACTCG 30263
Query 4018 TGACCATCTTTTGGTTTCCAGTCCTCTTATGTTACCTCGAAACACTGGAACTTTGCCGTA 4077
||||||||||| | ||||| ||| ||| || || ||||| | ||||| || || ||
Sbjct 30264 -GACCATCTTTTTGATTCCATCCCTTTTACTTTCCCACGAAAAATCGGAACCTTCCCATA 30322
Query 4078 ACTTAAGAAATCAGCAGATCTCATGGTCTCATCCCTATTAATTATTAGTCCGAGTTTCCT 4137
| | || |||| || || ||||||| ||||| |||||||| | ||||||| |
Sbjct 30323 ATTCAAATAATCCGCTGACTTCATGGTTTCATCTTGATTAATTAACAATCCGAGTCGATT 30382
Query 4138 CGTACCTTCCTCTATTTCTCTCATGATATCATCATTATTCCTTGATATA--TCATT-GAG 4194
|| |||| ||||| | ||||| || | ||| || |||||||| || || ||
Sbjct 30383 AGTTCCTTTTTCTATGTTACTCATTAT---TTTATTGTTGTTTGATATAATTCTTTGGAT 30439
Query 4195 ACACTGCTGAAGTTC-TTGATCATTTCTAGTCTTATGTAATGAGTATTGTGTACATATGA 4253
||| | | ||||| ||| | | || |||| || | | ||||| ||||| | |
Sbjct 30440 ACATTCATCTAGTTCATTGCTTGATCGTA-TCTTCTGCAGTTTATATTGAGTACAGACAA 30498
Query 4254 CTTGATTGTCACCCTGTGCCAATATTTGAACCCTGGT-GTTACGTCTGATGCTGGCTCGA 4312
||||||| || || || ||||| || || || || || | || | | |||
Sbjct 30499 CTTGATTATCTCCTTGCGCCAAGATACTAAGTCTCGTATTTTCAACT-TTACCTTCTCTT 30557
Query 4313 CGAATAATTAGCAGGTTGGTTATACTCCATCCTTTTTGCCTAAGCCCCTCTAGTCCACCA 4372
||| ||| | | ||||| ||||||||||| || |||||||||||||| ||
Sbjct 30558 TTAATGTTTATAA--TAAACGATACTTCATCCTTTTTGTCTCAGCCCCTCTAGTCCTCCT 30615
Query 4373 GATTGCCCCGACCAGCAGACTCTAT-------GTCCCCTTTTATTAACTATCTGTCCATC 4425
| ||| || |||||| || || | ||| ||| || ||| | | ||
Sbjct 30616 GCTTGACCATTCCAGCAAACCCTCTTCATAGGGTC----TTTGTTTTCTAAACGAGCTTC 30671
Query 4426 GATAATCTCCATCAGATCTGGTCTTTGATTGTAATAAATCAGACTCTGTTCAAAGAATTC 4485
|||| ||| ||||| ||||| | ||||||||||| | |||| || ||||||||
Sbjct 30672 TATAACTGTCATTAGATCAGGTCTATTGTTGTAATAAATTAAACTCGATTGGAAGAATTC 30731
Query 4486 ATGGGTTCTAGATATTAAGTTGGGGTATCCCAAAAATTGTCCCATTACCTTGAATGTGGG 4545
|||||||| ||| || || || || || || |||||||||||||| || |||| ||
Sbjct 30732 ATGGGTTCGAGAGATCAAATTAGGATACCCTAAAAATTGTCCCATGACTGTGAAAACAGG 30791
Query 4546 ATTATTGGCTGCTCCCCTCTGATGATTGTTCCATTTTTCATAATCTACATGGTTGGCAAA 4605
||| || ||| | | || |||||||||||||| |||||||||| | ||| || ||||
Sbjct 30792 ATTGTTCGCTTCATCTCTTTGATGATTGTTCCACTTTTCATAATTAATATGATTAGCAAT 30851
Query 4606 GCTTACATGATCATAATTATCCGTACCTTGACCATATGTGTTGTCCATTAATTTTTTAGT 4665
||| || ||||| ||| |||||||||| | | || ||| | || |
Sbjct 30852 TGTTATATATTCATATCCATCTAACCCTTGACCATTCGAAGTATC---TAACATCTTCTT 30908
Query 4666 CAAAACGG---TGGAGTTATCTGCCATGGTTAGACCTTTAAATAATGGGACAAAATGCTT 4722
|| || | | || ||||||||| || | || ||| ||||| |||||||||
Sbjct 30909 TAATACAGTATTAAGGTCATCTGCCATAGTCAATCCCGAAAACAATGGCACAAAATGCAC 30968
Query 4723 CTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAACTCCCAGGACATGAGCGCAAA 4782
|| |||| |||| |||||||||||| || ||||| || | ||||||||| || |||||
Sbjct 30969 TTTAATCAAATAT--TGTTATTACGAAATAATCTCTTAATTTCCAGGACATAAGAGCAAA 31026
Query 4783 AAATCTTCCTTTTATTTTCAGTTCACGCTCTTTGCCTTTAAGTCCGATAAGAAGTTTCTC 4842
|||||| ||| || |||| | || ||||| || || | |||||||| ||| | ||
Sbjct 31027 AAATCTACCTATTCTTTTAATTTTTCGCTCCTTCCCCCGTAATCCGATAACAAGATATTC 31086
Query 4843 CTTATCCAGCCCCTGGTCATTGA 4865
| || | || || |||||||
Sbjct 31087 CGGGTCTAAACCATGATCATTGA 31109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35843455711128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |