Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_031244.1 Length=12774 Score E Sequences producing significant alignments: (Bits) Value seq70 120 2e-23 >seq70 Length=138067 Score = 120 bits (132), Expect = 2e-23 Identities = 199/285 (70%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 10901 GATTCAAGTTAGTGCACTTTGCAGCACGACCTTTTAGTGCAATGTCATCAGGGGTTTGTA 10960 |||||| | | | |||||||| || |||||||| |||| ||||||||||| |||| | Sbjct 134968 GATTCAGGCTGCTTCACTTTGCTGCTCGACCTTTCAGTGTTATGTCATCAGGAATTTGCA 134909 Query 10961 AATATGTGGAGGCATTGGCGTTAATAGAGTTGATACCAATTCTCTCGTTCCAAGAAGGAT 11020 ||||| | | ||| || || || | ||||| | || | | ||||||| Sbjct 134908 AATATCTTTAATTATTAGCCTTGTATGAACTAATACCTAGGCTTCAGAGACTAGAAGGAA 134849 Query 11021 CAATTCATTCGCTCGCAGATGGCTCAGGGGGCTGCTTGACCACTCTTATGATGCT-GTTC 11079 | | ||||| || ||||| || |||||||| ||| | ||||| || |||||| | || Sbjct 134848 CTTTCCATTCACTAGCAGACGGGTCAGGGGGATGCCTCACCACACTGATGATGATACTTG 134789 Query 11080 CCTAATGCCAAAGGTGTATACAACACACTAATCCGAGCTGATATAGACAACAGAGACGTA 11139 | |||| ||| || || ||||| || | ||| |||| ||| | || ||||||| | Sbjct 134788 ACAAATG-CAACGGGGTTTACAAAACTTTGATCAGAGCAGATGTTGATCGCAGAGACATG 134730 Query 11140 ATAACCGATTGGCTACCACCTGCATATGTTGCATCCGGATTAGAT 11184 || || ||||| | || ||||| ||| ||||| | | |||||| Sbjct 134729 ATCACTTATTGGATGCCTCCTGCCTATATTGCAGCAGTTTTAGAT 134685 Score = 82.4 bits (90), Expect = 6e-12 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 11779 GTCCACACTGCTGATTATGATAGGATAGTGGGATTAGCTGTTAAGAAGTCTGGTTTCTCT 11838 ||||| | | |||| ||| | || |||| ||| ||||| ||||||| |||||||| || Sbjct 131486 GTCCATAGTTCTGACTATAAAAGAGTAGTTGGAATAGCTATTAAGAAATCTGGTTTTTCC 131427 Query 11839 AATCTTCTGAACAATCTCATTGTTGAAGCAATATCTCTCATGTGCTGGCACTC 11891 ||||| || || ||| | ||| |||||| || |||| | ||||||||||| Sbjct 131426 AATCTGCTCAATAATTTGATTACTGAAGCTTTAGCTCTATTATGCTGGCACTC 131374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40760971303272