Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_031244.1
Length=12774
Score E
Sequences producing significant alignments: (Bits) Value
seq8301 237 1e-58
>seq8301
Length=2439
Score = 237 bits (262), Expect = 1e-58
Identities = 372/521 (71%), Gaps = 10/521 (2%)
Strand=Plus/Minus
Query 7464 ATGGGCTAAGATCAGGTTTAAGAAAAACTTTGAGTTCAATTATTCCCCAGATCTCTCGGA 7523
||||| || | || ||| | || ||||| | |||||||||||||| || || || ||
Sbjct 526 ATGGGGGAAAGTTAGATTTCAAAAGAACTTCAACTTCAATTATTCCCCCGACCTTTCAGA 467
Query 7524 AATAACTAAGGATTCATCATGTGCCCCCAATAGGAGTGCCTTGGCAACACAATATGATAG 7583
||||||||||| ||||||||||| || || || || | || || ||||||||
Sbjct 466 GATAACTAAGGACTCATCATGTGCTCCGAACAGATCAGCATACAGCACCCAGTATGATAG 407
Query 7584 GTGTTCTTATCGATACCTCTACAATAAGAAACCACCCACACTTAAGCCGGGAA--CAAAA 7641
||||| ||| |||||| ||||| ||||| ||||||| |||| || | | |||||
Sbjct 406 ATGTTCGTATAAATACCTATACAACAAGAATCCACCCAAACTTG-GCAGATCAGTCAAAA 348
Query 7642 ATCGGATAT-CTGCGATCCATAGAGGCATACATTAAGGCTGAACCTGACCTGGTTAGGAC 7700
| ||||| || | ||| ||||| ||| | || || | || || | | | |
Sbjct 347 AA-GGATACACTAC-ATCTATAGATTGTTACTTGAAAGCAGGGCCGGATCATTTGAAAAA 290
Query 7701 TTTAATTAAAGAGAGAGAAGACGGAATCTACAGACAAGAGGATCATATCATTATCCAATG 7760
|| || |||| ||||| | || || |||| |||||||||||||| ||| |||| ||
Sbjct 289 GTTGATACAAGATAGAGAGAATGGTATTTACAATCAAGAGGATCATATTATTGTCCAGTG 230
Query 7761 CGGTAAAGAATTAGAACTAAAGGAATCATCAGGGAGAGCATTCACAAAACAGACAAGCAA 7820
|| || || |||||| |||| ||| || || ||||| |||||||| || ||| | ||
Sbjct 229 TGGAAATGAGTTAGAATTAAAAGAAGACTCTGGTAGAGCTTTCACAAAGCAAACAGGAAA 170
Query 7821 TCAGAGATATATCCAAGTGTCGCTTGAGCAAGGAATAGC-CACAAC-TATATTTCCCTTC 7878
|| || ||| ||||||||| ||| || | ||||| | || | | || ||||| ||
Sbjct 169 CCAAAGGTATGTCCAAGTGT-ACTT-AGAACAGAATATCTCAGACCAGATTTTTCCATTT 112
Query 7879 GTGCCTGAACAATCTATGACTGATTCTGAGATATCAATAATAAACAGACATATGGCTCAT 7938
|| ||||| ||||| |||||||| || ||||| | || |||||||| || ||||||||
Sbjct 111 GTACCTGAGCAATCCATGACTGACTCAGAGATTACTATCATAAACAGGCACATGGCTCAA 52
Query 7939 GTGTACTCTTTAGGAGGGACATCTGTGCTAATAAACATTGA 7979
|| | || || ||||| |||| || | ||||| |||||
Sbjct 51 GTCCATTCATTGGGAGGATCATCGGTAGTGATAAATATTGA 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40756775406072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |