Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_031244.1 Length=12774 Score E Sequences producing significant alignments: (Bits) Value seq8301 237 1e-58 >seq8301 Length=2439 Score = 237 bits (262), Expect = 1e-58 Identities = 372/521 (71%), Gaps = 10/521 (2%) Strand=Plus/Minus Query 7464 ATGGGCTAAGATCAGGTTTAAGAAAAACTTTGAGTTCAATTATTCCCCAGATCTCTCGGA 7523 ||||| || | || ||| | || ||||| | |||||||||||||| || || || || Sbjct 526 ATGGGGGAAAGTTAGATTTCAAAAGAACTTCAACTTCAATTATTCCCCCGACCTTTCAGA 467 Query 7524 AATAACTAAGGATTCATCATGTGCCCCCAATAGGAGTGCCTTGGCAACACAATATGATAG 7583 ||||||||||| ||||||||||| || || || || | || || |||||||| Sbjct 466 GATAACTAAGGACTCATCATGTGCTCCGAACAGATCAGCATACAGCACCCAGTATGATAG 407 Query 7584 GTGTTCTTATCGATACCTCTACAATAAGAAACCACCCACACTTAAGCCGGGAA--CAAAA 7641 ||||| ||| |||||| ||||| ||||| ||||||| |||| || | | ||||| Sbjct 406 ATGTTCGTATAAATACCTATACAACAAGAATCCACCCAAACTTG-GCAGATCAGTCAAAA 348 Query 7642 ATCGGATAT-CTGCGATCCATAGAGGCATACATTAAGGCTGAACCTGACCTGGTTAGGAC 7700 | ||||| || | ||| ||||| ||| | || || | || || | | | | Sbjct 347 AA-GGATACACTAC-ATCTATAGATTGTTACTTGAAAGCAGGGCCGGATCATTTGAAAAA 290 Query 7701 TTTAATTAAAGAGAGAGAAGACGGAATCTACAGACAAGAGGATCATATCATTATCCAATG 7760 || || |||| ||||| | || || |||| |||||||||||||| ||| |||| || Sbjct 289 GTTGATACAAGATAGAGAGAATGGTATTTACAATCAAGAGGATCATATTATTGTCCAGTG 230 Query 7761 CGGTAAAGAATTAGAACTAAAGGAATCATCAGGGAGAGCATTCACAAAACAGACAAGCAA 7820 || || || |||||| |||| ||| || || ||||| |||||||| || ||| | || Sbjct 229 TGGAAATGAGTTAGAATTAAAAGAAGACTCTGGTAGAGCTTTCACAAAGCAAACAGGAAA 170 Query 7821 TCAGAGATATATCCAAGTGTCGCTTGAGCAAGGAATAGC-CACAAC-TATATTTCCCTTC 7878 || || ||| ||||||||| ||| || | ||||| | || | | || ||||| || Sbjct 169 CCAAAGGTATGTCCAAGTGT-ACTT-AGAACAGAATATCTCAGACCAGATTTTTCCATTT 112 Query 7879 GTGCCTGAACAATCTATGACTGATTCTGAGATATCAATAATAAACAGACATATGGCTCAT 7938 || ||||| ||||| |||||||| || ||||| | || |||||||| || |||||||| Sbjct 111 GTACCTGAGCAATCCATGACTGACTCAGAGATTACTATCATAAACAGGCACATGGCTCAA 52 Query 7939 GTGTACTCTTTAGGAGGGACATCTGTGCTAATAAACATTGA 7979 || | || || ||||| |||| || | ||||| ||||| Sbjct 51 GTCCATTCATTGGGAGGATCATCGGTAGTGATAAATATTGA 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40756775406072