Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_001560.1 Length=11161 Score E Sequences producing significant alignments: (Bits) Value seq4993 131 1e-26 >seq4993 Length=28616 Score = 131 bits (144), Expect = 1e-26 Identities = 258/374 (69%), Gaps = 6/374 (2%) Strand=Plus/Plus Query 6294 ATGATCTAATTATTGGTCTTAAAGGAAAGGAGAGGGAACTGAAGTTGGCAGGTAGATTTT 6353 |||| ||| | || || | | || ||| || || ||||||||| | | |||||||| | Sbjct 21463 ATGAGCTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCT 21522 Query 6354 TCTCCCTAATGTCTTGGAAATTGCGAGAATACTTTGTAATTACCGAATATTTGATAAAGA 6413 | || |||||||||||| ||||||||||| |||| ||||| || || || |||| Sbjct 21523 TTGCCTTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGA 21582 Query 6414 CTCATTTCGTCCCTATGTTTAAAGGCCTGACAATGGCGGACGATCTAACTGCAGTCATTA 6473 ||||| |||||| | | ||| || |||| ||||| |||||| | | || |||| Sbjct 21583 AGCATTTTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTA 21642 Query 6474 AAAAGATGTTAGATTCCTCATCCGG-CCAAGGATTGAAGTCATATGAGGCAATTTGC-AT 6531 | |||||||| | | ||| || | ||| | | || |||||| ||| || | || Sbjct 21643 ACAAGATGTTGCAAGCTTCAGAAGGACAAAGCACGGGAG-AATATGA-CCAAGTTACTAT 21700 Query 6532 AGCCAATCACATTGATTACGAAAAATGGAATAACCACCAAAGGAAGTTATCAAACGGCCC 6591 ||||||||| | || || || || || || | || ||||| | | || | ||| Sbjct 21701 AGCCAATCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCC 21760 Query 6592 AGTGTTCCGAGTTATGGGCCAG-TTCTTAGGTTATCCATCCTTAATCGAGAGAACTCATG 6650 ||| ||| |||||||||||| | || | ||| | | || || ||||||||| Sbjct 21761 AGTCTTCAGAGTTATGGGCCTGTTTGTCAGGATGGAGA-ATTTGTTCTGTCGAACTCATG 21819 Query 6651 AATTTTTTGAGAAA 6664 | |||||||||||| Sbjct 21820 AGTTTTTTGAGAAA 21833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35586236817500