Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_002803.1
Length=11019
Score E
Sequences producing significant alignments: (Bits) Value
seq4993 84.2 2e-12
>seq4993
Length=28616
Score = 84.2 bits (92), Expect = 2e-12
Identities = 205/308 (67%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 6223 TCATTGGATTGAAAGGGAAAGAAAGAGAGCTTAAGATTGCGGGGAGATTCTTCTCTCTGA 6282
|||| || || | || ||||||||||| || ||| ||| || |||||||| | | |
Sbjct 21472 TCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAA 21531
Query 6283 TGTCATGGCAATTGAGGGAGTACTTTGTAATTACAGAGTATCTGATCAAGACACATTATG 6342
|||| ||| ||| | || || |||| ||||| ||| | || |||| |||| ||
Sbjct 21532 TGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTG 21591
Query 6343 TTCCGCTCTTCAAGGGATTAACGATGGCCGACGATCTAACCTCTGTGGTAAAGAAGATGT 6402
| || |||| ||||| || || ||||| |||||| | | |||| | || |||||||
Sbjct 21592 TCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAGATGT 21651
Query 6403 TAGATAACACTAATGGGCAAGGCTTGGACGACTACTCATCTATATGC-ATTGCGAACCAC 6461
| | | | || ||| || || || || | | | | | | || || || ||
Sbjct 21652 TGCAAGCTTCAGAAGGACAAAGCACGGGAGAATA-TGACCAAGTTACTATAGCCAATCAT 21710
Query 6462 ATTGATTATGAAAAATGGAACAATCATCAACGGAAAGAATCCAATGGGCCTGTATTTCGA 6521
| || ||| || || |||||| |||| |||||||| | |||| || || || ||
Sbjct 21711 GTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGA 21770
Query 6522 GTCATGGG 6529
|| |||||
Sbjct 21771 GTTATGGG 21778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35132012491380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |