Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq4993 84.2 2e-12 seq10207 78.8 7e-11 >seq4993 Length=28616 Score = 84.2 bits (92), Expect = 2e-12 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 6593 TAAGACCAAAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATGAGTTGGG 6652 ||||| ||||||| |||||||||||| | ||||| || |||||| | ||| |||| Sbjct 21481 TAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGGA 21540 Query 6653 AGCTCAGAGAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATTCCTCTTT 6712 | |||| || || | | |||| ||| | |||||| | ||||| | ||||| | Sbjct 21541 CTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTCTCT 21600 Query 6713 TTAAGGGGTTGACGATGGCCGATGAT 6738 |||||||||||| ||||| || ||| Sbjct 21601 GTAAGGGGTTGACTATGGCAGACGAT 21626 >seq10207 Length=801 Score = 78.8 bits (86), Expect = 7e-11 Identities = 112/155 (72%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 6586 ATAGGTCTAAGACCAAAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATG 6645 ||||| ||| ||| ||||| |||||| || || || || |||||||||| || ||| Sbjct 690 ATAGGACTACGACTAAAAGCGAGAGAGCTAAAACTAGTCGGACGGTTTTTTGCTCTCATG 631 Query 6646 AGTTGGGAGCTCAGAGAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATT 6705 |||| | ||||||||||| ||| | || ||| ||||||||| | ||||| || Sbjct 630 TCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCACCATTT-TTT 572 Query 6706 CCTCTT-TTTAAGGGGTTGACGATGGCCGATGATA 6739 || ||| | || || | || ||||| ||||||| Sbjct 571 CCCCTTGTGCAAAGGTCTAACCATGGCAGATGATA 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36478691655440