Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008514.1 Length=11545 Score E Sequences producing significant alignments: (Bits) Value seq13745 78.8 7e-11 seq4993 78.8 7e-11 >seq13745 Length=380153 Score = 78.8 bits (86), Expect = 7e-11 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 8567 GGATCAAAGACATCAGAGACCACCAGCATCATCCAACCATGGGACAGAGAAACAAACATC 8626 || ||||| || || ||||| || || | |||||||| ||||| ||||||||||| || Sbjct 109429 GGGTCAAAAACTTCTGAGACGACAAGTTTGATCCAACCTTGGGAAAGAGAAACAAATGTC 109370 Query 8627 CCAATGATCAAAAGAGCAGCCAAGCTGAGGAATGCCATATCCTGGTTTGTGAACCC 8682 ||||| ||| |||||| | |||||| | ||| ||||||||||||||| Sbjct 109369 CCAATTATCCGAAGAGCCTATATGCTGAGACGAGTAATAAACTGGTTTGTGAACCC 109314 >seq4993 Length=28616 Score = 78.8 bits (86), Expect = 7e-11 Identities = 201/300 (67%), Gaps = 16/300 (5%) Strand=Plus/Plus Query 6698 GATCTGGTTATCGGATTGAAAGGGAAAGAAAGAGAATTAAAGAAAGCAGGACGTTTCTTC 6757 || || || ||||| || | || |||||||||||| | ||| | || | ||||| Sbjct 21465 GAGCTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTT 21524 Query 6758 TCCCTTATGTCATGGAAATTACGAGAGTATTTCGTCATGACAGAATATCTGATCAAACAC 6817 || | ||||| |||| || ||||| ||||| | || || || | || || | Sbjct 21525 GCCTTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAG 21584 Query 6818 CACTTTGTCCCACTATTTCATGGATTGACTATGGC---GGATGACATGACTCAAGTTATG 6874 || |||||||| || | | | || ||||||||||| ||| ||| ||| || || Sbjct 21585 CATTTTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACT---GTAATT 21641 Query 6875 AAGAAAATGTT---AG--ACAGAAGTCAAGGGCAAGGAGAGAATGACTACCAGAGAGTCA 6929 || || ||||| || |||||| | ||| || |||||| | |||| ||| | Sbjct 21642 AACAAGATGTTGCAAGCTTCAGAAGGACAAAGCACGG-GAGAAT-ATGACCA---AGTTA 21696 Query 6930 GTATTGCAAACCATATTGACTATGAAAAGTGGAACAATCACCAAAGGAGAGAATCAAATG 6989 ||| || || ||| | |||||| ||||| |||||| | || |||| |||| | |||| Sbjct 21697 CTATAGCCAATCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATG 21756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36814561755740