Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq4993 136 3e-28 >seq4993 Length=28616 Score = 136 bits (150), Expect = 3e-28 Identities = 247/359 (69%), Gaps = 2/359 (1%) Strand=Plus/Plus Query 8399 TCATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAA 8458 |||| || ||| ||| |||||||||||| |||| | | || |||||||| | |||| Sbjct 21472 TCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAA 21531 Query 8459 TGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTG 8518 |||| ||| | |||| ||||||| | |||| ||| | |||||| | |||||| Sbjct 21532 TGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTG 21591 Query 8519 TTCCTCTATTCCATGGATTAACTATGGCTGATGATCTACAA-TCTGTTATAAAGAAGATG 8577 | ||||| | | || || |||||||| || ||| ||||| |||| || || |||||| Sbjct 21592 TCCCTCTCTGTAAGGGGTTGACTATGGCAGACGAT-TACAACACTGTAATTAACAAGATG 21650 Query 8578 TTAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCAT 8637 || || ||| |||| ||| | | || ||||| | ||| | ||||| |||||| Sbjct 21651 TTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCAT 21710 Query 8638 ATTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAA 8697 | || ||| || || || ||| | || ||||||||| | ||| | || |||| | Sbjct 21711 GTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGA 21770 Query 8698 GTAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTTGA 8756 || ||||||| || | || | | || || || ||||| ||||| || ||||| Sbjct 21771 GTTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGA 21829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42092068265705