Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_013135.1
Length=12390
Score E
Sequences producing significant alignments: (Bits) Value
seq4993 84.2 2e-12
>seq4993
Length=28616
Score = 84.2 bits (92), Expect = 2e-12
Identities = 200/297 (67%), Gaps = 8/297 (3%)
Strand=Plus/Plus
Query 7584 GCAAAAGAAAGAGAACAGAAAATCGATGGGAGGTTCTTCTCTTTAATGTCTTGGGACATC 7643
|||||||||||||||| ||| | | || || ||||| | |||||||||||| |
Sbjct 21486 GCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGGACTTTG 21545
Query 7644 CGCGACTACTTTGTCATGACTGAATACCTCATTAAGACCCACTTTGTCCCCTTATTCAAA 7703
|| || || |||| || || || | ||||||| || |||||||| | | ||
Sbjct 21546 CGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTCTCTGTAAG 21605
Query 7704 GGGCTGACCATGGCAGATGACCTCACAACA--GTAATTGGCAAGATATTGGAGAACTCTC 7761
||| |||| |||||||| || | |||||| |||||| |||||| ||| | | || ||
Sbjct 21606 GGGTTGACTATGGCAGACGA--TTACAACACTGTAATTAACAAGATGTTGCA-AGCT-TC 21661
Query 7762 GG--GGTCAGGGAGAGGCAGACTATGAGAACTTGACTATCACTGATCACATTGACTATGA 7819
| || || | || ||| ||||| | | ||||| | |||| | ||||||
Sbjct 21662 AGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCATGTAGACTATAG 21721
Query 7820 AAAATGGAACAACCACCAGAGAGGGGAAGCCAACAATCCAATCTTCTTGGTCATGGG 7876
|| || ||||| | ||||| ||||| || | ||| ||||| || |||||
Sbjct 21722 TAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTATGGG 21778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39517516372440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |