Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq4993 118 1e-22 >seq4993 Length=28616 Score = 118 bits (130), Expect = 1e-22 Identities = 245/365 (67%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 9839 TAGTAATAGGGTTGAAGGCTAAAGAAAGAGAATTAAAAATTGATGGCAGATTCTTCTCAT 9898 |||| || ||||| | || |||||||||||| | || ||| || |||||||| | | Sbjct 21469 TAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCT 21528 Query 9899 TAATGTCATATGATATGAGAGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACT 9958 ||||||| | | || |||| ||||||| ||| |||||| | || || || | | Sbjct 21529 TAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATT 21588 Query 9959 ATGTTCCATTATTCAAAGGATTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaa 10018 ||| || | | || || || || ||||| || || | || ||||| | || || | Sbjct 21589 TTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAGA 21648 Query 10019 TGTTAAAAGTATCTAAAGGACAGGGCCTGATTGATTACAAAGAGATTACGATCGCTAATC 10078 |||| ||| || ||||||| || | || || | | |||| || || |||| Sbjct 21649 TGTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATC 21708 Query 10079 ATTTGGATTATGAGAAGTGGAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCC 10138 || | || ||| ||||| || || ||||| || ||||| | |||| ||| || ||| Sbjct 21709 ATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCA 21768 Query 10139 GAGTCATGGGTCAATTTTTGGGCTTACCTAATTTAATAGAAAGAACTCATGAGTTTTTTG 10198 |||| ||||| | ||| | | | ||||| | |||||||||||||||||| Sbjct 21769 GAGTTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTG 21828 Query 10199 aaaaa 10203 | ||| Sbjct 21829 AGAAA 21833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46957334306600