Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq4993 165 8e-37 >seq4993 Length=28616 Score = 165 bits (182), Expect = 8e-37 Identities = 283/403 (70%), Gaps = 6/403 (1%) Strand=Plus/Plus Query 11017 GTAATTGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCATTG 11076 || || ||||||| |||||| ||||| ||| ||||| || |||||||||||| | || Sbjct 21471 GTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTA 21530 Query 11077 ATGAGTTGGGAGTTAAGAGAGTATTTT-GTATTCACAGAGTATTTGATTAAAGAACATTT 11135 ||| |||| || |||| |||||| ||||| || ||| || ||||| | ||||| Sbjct 21531 ATGTCTTGGACTTTGCGAGAATATTTTGGTATT-ACGGAGCTGTTAATTAAGAAGCATTT 21589 Query 11136 TGTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAA-ACTGTAATTAAAAAGA 11194 ||| || | | || || || ||||||||||| ||| ||||| ||||||||||| |||| Sbjct 21590 TGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGAT-TACAACACTGTAATTAACAAGA 21648 Query 11195 TGATTGATGTATCAGCAGGACAAGGTACTGAAACCTATGAAAACATAACAATAGCGAATA 11254 || | | | |||| ||||||| | || | | ||||| | | || ||||| ||| Sbjct 21649 TGTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATC 21708 Query 11255 ATATTGACTATGAGAAGTGGAATAATTATCAAAGATATGATTCAAATAGTGCAATTTTCA 11314 || | |||||| ||||| || |||||||| || | || | ||| || | |||| Sbjct 21709 ATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCA 21768 Query 11315 CTGTCATGGGACAATTTTTAGGGTATCCA-AAGTTAATAGCAAGAACTCATGAGTTTTTT 11373 || ||||| | ||| | || || | || || | ||||||||||||||||| Sbjct 21769 GAGTTATGGGCCTGTTTGTCAGG-ATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTT 21827 Query 11374 GAGAAAAGCCTGATCTACTATAATCAGAGACCAGATCTGATGA 11416 |||||| | |||||||| | ||||| ||||| |||| Sbjct 21828 GAGAAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGA 21870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50635872075850