Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq4993 118 8e-23 >seq4993 Length=28616 Score = 118 bits (130), Expect = 8e-23 Identities = 281/417 (67%), Gaps = 6/417 (1%) Strand=Plus/Plus Query 6302 GTGATCGGATTAAAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTCATTG 6361 || ||||| |||| || ||||||||||||||||||| ||| |||||||| || | || Sbjct 21471 GTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTA 21530 Query 6362 ATGTCTTGGAAGCTTAGGGAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCACTTT 6421 |||||||||| | | ||||| |||| | | || ||| || || |||| || ||| Sbjct 21531 ATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTT 21590 Query 6422 GTGCCATTGTTCCATGGGCTGACCATGGCTGATGA-TATGACAGCAGTGATCAAAAAGAT 6480 || || | | | ||| |||| ||||| || || || ||| | || || || ||||| Sbjct 21591 GTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACA-CTGTAATTAACAAGAT 21649 Query 6481 GCTGGAAAGCTCGTCTGGTCAAGGGCTAACAAACTACGACAGCGTTTGTATTGCAAATCA 6540 | || || || || ||| | | | || ||| ||| ||| || ||||| Sbjct 21650 GTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCA 21709 Query 6541 TATTGACTATGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAA 6600 | | |||||| || || || ||| |||| | ||| | |||| || || || | Sbjct 21710 TGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAG 21769 Query 6601 AGTCATGGGACAATTCTTGGGTTATCCA-AATTTGATATACCGGACACATGAGTTTTTTG 6659 ||| ||||| | || | | || | |||||| | | || || ||||||||||||| Sbjct 21770 AGTTATGGGCCTGTTTGTCAG-GATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTG 21828 Query 6660 AGAAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAA-ATGGG 6715 ||||| || | |||||| || ||||| ||||| |||| | | |||| ||||| Sbjct 21829 AGAAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGATAAT-AGAAGATGGG 21884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35455087540240