Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq4993 109 4e-20 >seq4993 Length=28616 Score = 109 bits (120), Expect = 4e-20 Identities = 279/423 (66%), Gaps = 4/423 (1%) Strand=Plus/Plus Query 6254 ATGACCTGGTGATTGGGCTAAAAGGGAAGGAAAGAGAATTGAAGATAGCCGGGAGATTTT 6313 |||| || || || ||| ||| || || ||||||||| ||||| | | ||| ||||| | Sbjct 21463 ATGAGCTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCT 21522 Query 6314 TCTCACTAATGTCGTGGAAGCTGAGAGAATATTTTGTGATCACGGAATATCTAATTAAGA 6373 | | ||||||| |||| || |||||||||||| || ||||| ||||||||| Sbjct 21523 TTGCCTTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGA 21582 Query 6374 CACACTTTGTACCACTTTTCCACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAA 6433 || ||||| || || | | || ||||| |||||||| || | ||||||| | Sbjct 21583 AGCATTTTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTA 21642 Query 6434 AGAAAATGTTGGAAAGTTCAAGTGGACAGGGTCTAAAAGATTATTCGGCAGTATGCATTG 6493 | || |||||| || |||| ||||| | ||| ||| ||| || | Sbjct 21643 ACAAGATGTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAG 21702 Query 6494 CAAACCACATTGACTATGAGAAATGGAACAACCATCAGAGGAAACGGTCAAATGAACCAA 6553 | || || | |||||| || || ||||| ||||||||||| | ||||| ||| Sbjct 21703 CCAATCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAG 21762 Query 6554 TTTTTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAA--CCTTATATCGAGGACTCATGA 6611 | || | ||| ||||| | || | || | || || | |||| |||||||| Sbjct 21763 TCTTCAGAGTTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGA--ACTCATGA 21820 Query 6612 ATTCTTTGAGAAAAGTCTCATCTATTATAATGGAAGGCCTGATTTGATGAAGGTGCAAGA 6671 || ||||||||| || |||| ||| | || |||||| | |||| | |||| Sbjct 21821 GTTTTTTGAGAAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGATAATAGAAGA 21880 Query 6672 TGG 6674 ||| Sbjct 21881 TGG 21883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35352727128720