Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq4993 109 4e-20 >seq4993 Length=28616 Score = 109 bits (120), Expect = 4e-20 Identities = 240/353 (68%), Gaps = 10/353 (3%) Strand=Plus/Plus Query 5958 AGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAAATT 6017 |||||| ||| | || |||| || ||| | ||||| | |||||||||||| || Sbjct 21485 AGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGGACTTT 21544 Query 6018 AAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCA 6077 ||||||| || | || || ||| | || |||| |||||||| ||| | | | | Sbjct 21545 GCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTCTCTGTAA 21604 Query 6078 CGGGCTCACCATGGCGGACGACCTGACA--GCTGTTATGAAGAAAATGATGGAGTCATCT 6135 ||| | || ||||| ||||| | ||| |||| || || || ||| || | | || Sbjct 21605 GGGGTTGACTATGGCAGACGA--TTACAACACTGTAATTAACAAGATGTTGCAAGCTTCA 21662 Query 6136 TCAGGACAAGGCGCCTCCGACTATGATGCCA--TTGCCATTGCGAACCATATTGACTATG 6193 ||||||| || | || ||||| ||| || | || || || ||| | |||||| Sbjct 21663 GAAGGACAAAGCACGGGAGAATATGA--CCAAGTTACTATAGCCAATCATGTAGACTATA 21720 Query 6194 AAAAATGGAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTC 6253 || || || || |||| |||||||| | |||| || ||||||||||| ||||| | Sbjct 21721 GTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTATGGGCC 21780 Query 6254 AGTTCCTAGGGTATCCA-AATTTAATTTACCGGACGCATGAGTTTTTTGAGAA 6305 ||| | || || | ||||| | | || || ||||||||||||||||| Sbjct 21781 TGTTTGTCAGG-ATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGAGAA 21832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34086017036160