Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_024473.1 Length=11123 Score E Sequences producing significant alignments: (Bits) Value seq4993 113 3e-21 >seq4993 Length=28616 Score = 113 bits (124), Expect = 3e-21 Identities = 212/312 (68%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 6208 ATTGGATTAAAGGGAAAAGAAAGAGAATTGAAAATAGCTGGGAGATTCTTCTCATTGATG 6267 || || |||| | ||||||||||||| |||| | | || |||||||| | || ||| Sbjct 21474 ATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATG 21533 Query 6268 TCATGGAGATTAAGGGAATATTTTGTGATCACGGAGTACTTAATCAAAACATACTACGTT 6327 || |||| || | |||||||||| || |||||| ||||| || | | | || Sbjct 21534 TCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTC 21593 Query 6328 CCCTTGTTTAAGGGGTTAACTATGGCAGATGACCTCACATCGGTGATTAAGAAGATGATG 6387 || | | ||||||||| ||||||||||| || || | || ||||| |||||| || Sbjct 21594 CCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAGATGTTG 21653 Query 6388 GACAGTTCATCAGGTCAAGGGCTCGATGATTATTCATCAGTTTGTTTGGCTAACCATATT 6447 | |||| ||| ||| | | || ||| |||| | | || || ||| | Sbjct 21654 CAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCATGTA 21713 Query 6448 GACTACGAGAAGTGGAATAACCATCAAAGAAAGGAATCTAATGGTCCCATCTTCAGAGTC 6507 ||||| ||||| || || |||| || || ||| |||||| || |||||||||| Sbjct 21714 GACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTT 21773 Query 6508 ATGGGACAGTTT 6519 ||||| | |||| Sbjct 21774 ATGGGCCTGTTT 21785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35464683828820