Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_025353.1
Length=11070
Score E
Sequences producing significant alignments: (Bits) Value
seq4993 152 4e-33
>seq4993
Length=28616
Score = 152 bits (168), Expect = 4e-33
Identities = 223/310 (72%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 6240 GTCATCGGGCTGAAAGGGAAAGAACGAGAATTAAAATTGGCCGGCAGAtttttttCTCTT 6299
||||||||| | | || |||||| ||||| | || | | ||| ||||| ||| | |
Sbjct 21471 GTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTA 21530
Query 6300 ATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTAATAAAGACACATTTT 6359
||||| |||| ||| |||||||||| | ||||||||| ||||| |||| ||||||
Sbjct 21531 ATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTT 21590
Query 6360 GTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGCTGTCATAAAGAAAAT 6418
||||| | | |||||| ||||| |||||||| || | |||| |||| || || || ||
Sbjct 21591 GTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACA-CTGTAATTAACAAGAT 21649
Query 6419 GATGGATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGC-ATAGCCAATC 6477
| || | | ||| |||||| | || | || ||| ||| || | ||||||||||
Sbjct 21650 GTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGAC-CAAGTTACTATAGCCAATC 21708
Query 6478 ACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTTA 6537
| | || ||| ||||| |||||| | ||| |||||||| | |||| || || || |
Sbjct 21709 ATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCA 21768
Query 6538 GGGTAATGGG 6547
| || |||||
Sbjct 21769 GAGTTATGGG 21778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35295149397240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |