Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq4993 152 4e-33 >seq4993 Length=28616 Score = 152 bits (168), Expect = 4e-33 Identities = 223/310 (72%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 6240 GTCATCGGGCTGAAAGGGAAAGAACGAGAATTAAAATTGGCCGGCAGAtttttttCTCTT 6299 ||||||||| | | || |||||| ||||| | || | | ||| ||||| ||| | | Sbjct 21471 GTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTA 21530 Query 6300 ATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTAATAAAGACACATTTT 6359 ||||| |||| ||| |||||||||| | ||||||||| ||||| |||| |||||| Sbjct 21531 ATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTT 21590 Query 6360 GTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGCTGTCATAAAGAAAAT 6418 ||||| | | |||||| ||||| |||||||| || | |||| |||| || || || || Sbjct 21591 GTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACA-CTGTAATTAACAAGAT 21649 Query 6419 GATGGATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGC-ATAGCCAATC 6477 | || | | ||| |||||| | || | || ||| ||| || | |||||||||| Sbjct 21650 GTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGAC-CAAGTTACTATAGCCAATC 21708 Query 6478 ACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTTA 6537 | | || ||| ||||| |||||| | ||| |||||||| | |||| || || || | Sbjct 21709 ATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCA 21768 Query 6538 GGGTAATGGG 6547 | || ||||| Sbjct 21769 GAGTTATGGG 21778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35295149397240