Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq4993 113 3e-21 seq10207 80.6 2e-11 >seq4993 Length=28616 Score = 113 bits (124), Expect = 3e-21 Identities = 248/357 (69%), Gaps = 16/357 (4%) Strand=Plus/Plus Query 6311 TAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGATGTCCTGGC 6370 ||| || |||||||||||| |||| | | ||| ||||||||| || | ||||| ||| Sbjct 21481 TAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGGA 21540 Query 6371 AACTGAGAGAATATTTTGTCATCACCGAGTACTTAATAAAGACTCATTATGTACCATTAT 6430 || |||||||||||| || || ||| ||||| |||| |||| ||| || | | Sbjct 21541 CTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTCTCT 21600 Query 6431 TCAAAGGACTCACAATGGCGGATGATCTGACATCA--GTTGTAAAGAAGATGTTGGA--C 6486 || || | || ||||| || || | ||| || || | || ||||||||| | | Sbjct 21601 GTAAGGGGTTGACTATGGCAGACGA--TTACAACACTGTAATTAACAAGATGTTGCAAGC 21658 Query 6487 AACACGAATGGAC-AAGGACTGGATGATTATTCATCGATTTGC-ATCGCCAATCACATCG 6544 || ||| |||| ||| || ||| || || | | | | || | || |||||||| | | Sbjct 21659 TTCA-GAA-GGACAAAGCACGGGA-GAATA-TGACCAAGTTACTATAGCCAATCATGTAG 21714 Query 6545 ACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGTTTCGAGTCA 6604 ||||| ||||| || ||| ||||||| |||||| | |||| || || || |||| | Sbjct 21715 ACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTA 21774 Query 6605 TGGGGCAGTTTTTGGGTTATCCCAGA--TTGTTTGAAAGAACCCATGAGTTTTTTGA 6659 |||| | |||| | | || ||| ||||| |||| |||||||||||||| Sbjct 21775 TGGGCCTGTTTGTCAG-GAT-GGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGA 21829 >seq10207 Length=801 Score = 80.6 bits (88), Expect = 2e-11 Identities = 113/156 (72%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 6302 TAATAGGACTAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGA 6361 ||||||||||| | |||| ||||| | ||| | | |||| | || ||| | || | Sbjct 692 TAATAGGACTACGACTAAAAGCGAGAGAGCTAAAACTAGTCGGACGGTTTTTTGCTCTCA 633 Query 6362 TGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAG-TACTTAATAAAGACTCATTAT 6420 |||||||| | | ||||| || ||||| ||||| ||| |||| | ||| || |||| | Sbjct 632 TGTCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCAC-CATTTT 574 Query 6421 GTACCATTATTCAAAGGACTCACAATGGCGGATGAT 6456 | || || | |||||| || || ||||| |||||| Sbjct 573 TTCCCCTTGTGCAAAGGTCTAACCATGGCAGATGAT 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35381515994460