Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025359.1 Length=11526 Score E Sequences producing significant alignments: (Bits) Value seq4993 93.3 3e-15 >seq4993 Length=28616 Score = 93.3 bits (102), Expect = 3e-15 Identities = 229/343 (67%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 6619 TCAATGAGAACGGTCTGGGCTTGAATGATCTGGTTATAGGACTCAAAGAAAAAGAAAGAG 6678 ||||||| | || ||| || ||||| || || || || | | || ||||||||||| Sbjct 21439 TCAATGACGAGGGACTGTCTTTAAATGAGCTAGTCATCGGGTTAAGAGCAAAAGAAAGAG 21498 Query 6679 AACTTAAGGAGGAGGGAAGATTCTTTTCTCTTATGGGTTGGAAACTTCGACTTTATTTTG 6738 |||| ||| | || ||||||||| | | ||| ||||| | ||| ||||||| Sbjct 21499 AACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGGACTTTGCGAGAATATTTTG 21558 Query 6739 TGATAACTGAGTTCTTAATCAAGAA--ATTCTACGTGCCGATGTTCAAAGGACTGACTAT 6796 || || ||| | ||||| ||||| ||| | || || | | || || ||||||| Sbjct 21559 GTATTACGGAGCTGTTAATTAAGAAGCATTTT--GTCCCTCTCTGTAAGGGGTTGACTAT 21616 Query 6797 GGCGGATGACCTGAACACGGTAACTAAAAAACTCCTTAAAGCAACAGAAGGGCAAGGAAG 6856 ||| || || ||||| |||| ||| || | | |||| ||||||| ||| | | Sbjct 21617 GGCAGACGATTACAACACTGTAATTAACAAGATGTTGCAAGCTTCAGAAGGACAAAGCAC 21676 Query 6857 AGACGATTATGACGAAATTTACATCGCCAACTCGT-TGGATTACGACAAATGGAACAACA 6915 | || |||||| || || || ||||| || | | || || || || ||||| Sbjct 21677 GGGAGAATATGACCAAGTTACTATAGCCAA-TCATGTAGACTATAGTAAGTGAAACAATT 21735 Query 6916 ACCAACGCTATGAGTCTAATGAACATGTATTCAGAGTTATGGG 6958 | || | | || ||||||| | || |||||||||||||| Sbjct 21736 ATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTATGGG 21778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36753785261400