Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq4993 100 2e-17 seq10207 82.4 5e-12 >seq4993 Length=28616 Score = 100 bits (110), Expect = 2e-17 Identities = 211/310 (68%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 6291 TCATAGGATTGAAGGGAAAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCACTGA 6350 |||| || || | | |||||| ||||| | ||| | | ||| || |||||| | | | Sbjct 21472 TCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAA 21531 Query 6351 TGTCTTGGCAGTTGAGAGAGTACTTTGTGATAACGGAATATCTGATTAAGACCCATTATG 6410 |||||||| ||| |||| || |||| || ||||| | ||||||| |||| || Sbjct 21532 TGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTG 21591 Query 6411 TTCCACTATTTAAAGGATTGACTATGGCAGATGACCTCACATCA--GTCGTGAAGAAGAT 6468 | || || | ||| || |||||||||||||| || | ||| || || | || ||||| Sbjct 21592 TCCCTCTCTGTAAGGGGTTGACTATGGCAGACGA--TTACAACACTGTAATTAACAAGAT 21649 Query 6469 GTTGGACAACACAAACGGACAAGGATTAGACGACTATTCATCGA-TTTGTATAGCGAATC 6527 |||| | || | |||||| | | || || | | | | || |||||| |||| Sbjct 21650 GTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATA-TGACCAAGTTACTATAGCCAATC 21708 Query 6528 ACATTGATTACGAAAAATGGAACAATCATCAGAGGAAAGAGTCAAATGGACCGGTCTTTC 6587 | | || || || || |||||| ||||||||||||| | |||| || ||||| Sbjct 21709 ATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCA 21768 Query 6588 GCGTCATGGG 6597 | || ||||| Sbjct 21769 GAGTTATGGG 21778 >seq10207 Length=801 Score = 82.4 bits (90), Expect = 5e-12 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 6307 AAAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCACTGATGTCTTGGCAGTTGAG 6366 ||||| ||||||| |||| | | |||| |||| ||| | || ||||| ||| || || Sbjct 676 AAAAGCGAGAGAGCTAAAACTAGTCGGACGGTTTTTTGCTCTCATGTCCTGGGCATTAAG 617 Query 6367 AGAGTACTTTGTGATAACGGAATATCTGATTAAGACCCATTATGTTCCACTATTTAAAGG 6426 |||||||||||| || || || ||||||||| ||||| | | || | | ||||| Sbjct 616 AGAGTACTTTGTTATCACAGAGCTACTGATTAAGCACCATTTTTTCCCCTTGTGCAAAGG 557 Query 6427 ATTGACTATGGCAGATGA 6444 | || ||||||||||| Sbjct 556 TCTAACCATGGCAGATGA 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35333534551560