Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025387.1 Length=11492 Score E Sequences producing significant alignments: (Bits) Value seq4993 104 2e-18 >seq4993 Length=28616 Score = 104 bits (114), Expect = 2e-18 Identities = 249/370 (67%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 6593 CTGGTGATCGGGCTAAAACCAAAAGAAAGAGAATTGAAGCTGGTGGGTAGGTTCTTCTCG 6652 || || |||||| ||| | |||||||||||||| ||||||| || ||||| ||||| | Sbjct 21468 CTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCC 21527 Query 6653 TTGATGTCATGGGAGCTCAGGGAGTACTTTGTGGTGACTGAGTATCTGATCAAGAAGCAT 6712 || ||||| ||| | | || || |||| | || ||| | || ||||||||| Sbjct 21528 TTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCAT 21587 Query 6713 TTTGTCCCTTTGTTTAAGGGGTTGGCCATGGCTGATGACCTGACA--GAGGTGATAAAAA 6770 ||||||||| | | |||||||||| | ||||| || || | ||| || || || | Sbjct 21588 TTTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGA--TTACAACACTGTAATTAACA 21645 Query 6771 AGATGCTGGACAGTGCATATGG-CCAGGGACTGGACGACTACAGTGCAGTGTGTATTGCC 6829 ||||| || | | || | || | | | || ||| || || ||| ||| ||| Sbjct 21646 AGATGTTGCAAGCTTCAGAAGGACAAAGCACGGGA-GAATATGACCAAGTTACTATAGCC 21704 Query 6830 AACCACATTGATTATGAGAAGTGGAACAACCACCAGAGGAAGGAGTCCAACAGATATGTA 6889 || || | || ||| ||||| ||||| | |||||||| || | || || Sbjct 21705 AATCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTC 21764 Query 6890 TTCAGAGTTATGGGTCAATGTTTG--GGGTACCCTAACTTGATTGAACGGACTCATGAGT 6947 |||||||||||||| | |||||| || || ||| | || |||||||||| Sbjct 21765 TTCAGAGTTATGGGCC--TGTTTGTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGT 21822 Query 6948 TCTTTGAGAA 6957 | |||||||| Sbjct 21823 TTTTTGAGAA 21832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36645027324160