Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025391.1 Length=11156 Score E Sequences producing significant alignments: (Bits) Value seq4993 96.9 2e-16 >seq4993 Length=28616 Score = 96.9 bits (106), Expect = 2e-16 Identities = 276/421 (66%), Gaps = 9/421 (2%) Strand=Plus/Plus Query 6359 TTAGAAGAGCTGATTATAGGGTTGAGGGCCAAAGAACGAGAACTCAAGATTAAAGGAAGA 6418 ||| | ||||| | || ||||| || || |||||| ||||||| ||| || || ||| Sbjct 21459 TTAAATGAGCTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGA 21518 Query 6419 TTCTTTGCTCTGATGAGCTGGGCACTTCGAGAATATTTTGTAATCACCGAGTGGCTTATC 6478 |||||||| | ||| ||| | | ||||||||||||| || || ||| | | || Sbjct 21519 TTCTTTGCCTTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATT 21578 Query 6479 AAACAACACTTCCTACCTTTATTTGAGGGACTCACTATGGCAGATGATCTGAACACCGTG 6538 || | || || | ||| | | | |||| | ||||||||||| ||| ||||| || Sbjct 21579 AAGAAGCATTTTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTA 21638 Query 6539 ATTACTAAGATGATAAACAAAACAACAGGTCATGACCATTCATCTTGT-ACAGAGTTAAT 6597 |||| |||||| | | || ||| || | | | | || |||| Sbjct 21639 ATTAACAAGATGTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTT--- 21695 Query 6598 CACTATCTGCAACCATCTGGACTATGAAAAGTGGAATAACAATCAACGTGGGA--AATCT 6655 ||||| ||| ||| | |||||| ||||| || || |||| | || | || || Sbjct 21696 -ACTATAGCCAATCATGTAGACTATAGTAAGTGAAACAATTATCA--GAGGAAAGAAGCT 21752 Query 6656 AATGATCCTGTATTTAAAGTAATGGGGCAGTTTTTGGGTTACCCTAACTTGATTACTCGT 6715 ||||| || || || | ||| ||||| | |||| | | || ||| | ||| Sbjct 21753 AATGACCCAGTCTTCAGAGTTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGA 21812 Query 6716 ACTCATGAAGTTTTTGAGAAATCATTCATATATTTTGTCAACAGACCCGACATGATGGTA 6775 |||||||| ||||||||||||||||| | || | | | ||||||| || | ||| || Sbjct 21813 ACTCATGAGTTTTTTGAGAAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGATA 21872 Query 6776 A 6776 | Sbjct 21873 A 21873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35570243003200