Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025395.1 Length=11876 Score E Sequences producing significant alignments: (Bits) Value seq4993 89.7 4e-14 >seq4993 Length=28616 Score = 89.7 bits (98), Expect = 4e-14 Identities = 208/311 (67%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 6983 CTGGTTATAGGGCTCAAAGCTAAGGAAAGAGAATTGAAGAGATTTGGTAGATTTTTCACA 7042 || || || ||| | | ||| || ||||||||| ||||| | |||||||| || | Sbjct 21468 CTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCC 21527 Query 7043 TTGATGAGTTGGGATCTGAGATTGTACTTCGTTATCTCGGAATATTTAATTAAAAAAGAC 7102 || ||| |||| | || || || || | ||| |||| |||||||| || | Sbjct 21528 TTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCAT 21587 Query 7103 ATAGTAAAACTCTTTGATGGTTTAACTATGGCAGATAGTTTCATAGATGTGATTAACAAA 7162 | || |||| | | || || ||||||||||| || || ||| |||||||| Sbjct 21588 TTTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAG 21647 Query 7163 ATGTTGAGTAGAACAAATGGACAAGCTCACTGTA-CTTATGACAAGATTACTTTTGCCAA 7221 |||||| || | |||||| ||| | | |||||| | ||||| | ||||| Sbjct 21648 ATGTTGCAAGCTTCAGAAGGACAA-AGCACGGGAGAATATGACCAAGTTACTATAGCCAA 21706 Query 7222 TCATATAGATTATAGTAAATGGAATAATCATCAGAGAGATGAAGCAGTAGGTCCCGTATT 7281 |||| |||| |||||||| || || ||| ||||||| | ||||| | || || || Sbjct 21707 TCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTT 21766 Query 7282 CAGTGTGATGG 7292 ||| || |||| Sbjct 21767 CAGAGTTATGG 21777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37873352262400