Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq4993 150 1e-32 >seq4993 Length=28616 Score = 150 bits (166), Expect = 1e-32 Identities = 227/319 (71%), Gaps = 14/319 (4%) Strand=Plus/Plus Query 6308 TAGTCATAGGATTAAAAGGTAAGGAAAGAGAGCTGAAACAAGCAGGTAGATTCTTTTCAT 6367 ||||||| || |||| || || |||||||| ||||| | | |||||||||||| | | Sbjct 21469 TAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCT 21528 Query 6368 TGATGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATATTTAATAAAACACCATT 6427 | ||||| ||| || ||||| || |||| ||||| || ||||| || | |||| Sbjct 21529 TAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATT 21588 Query 6428 TTGTACCTCTATTTAAGGGATTAACAATGGCAGATGA-TATGACAGAAGTGATCAAAAAG 6486 |||| ||||| | |||||| || || |||||||| || || ||| || || || ||| Sbjct 21589 TTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACA-CTGTAATTAACAAG 21647 Query 6487 ATGCTGGAA-----AGAA-GTCAAGGCCAAGGAGAATTAGACTATCAACATGTGAGCATA 6540 ||| || || |||| | ||| || |||||| ||| | || || | ||| Sbjct 21648 ATGTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAA------TATGACCAAGTTACTATA 21701 Query 6541 GCGAACCATATAGATTATGAAAAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCA 6600 || || ||| |||| ||| ||||| |||||| |||| ||||||||| | |||| ||| Sbjct 21702 GCCAATCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCA 21761 Query 6601 GTTTTCCGTGTGATGGGCC 6619 || ||| | || ||||||| Sbjct 21762 GTCTTCAGAGTTATGGGCC 21780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35522261560300