Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028230.1 Length=12020 Score E Sequences producing significant alignments: (Bits) Value seq4993 116 3e-22 >seq4993 Length=28616 Score = 116 bits (128), Expect = 3e-22 Identities = 246/362 (68%), Gaps = 4/362 (1%) Strand=Plus/Plus Query 7194 ATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGAtttttttCATTAATG 7253 ||||| |||| |||||||||||| || |||| |||| ||||| ||| | |||||| Sbjct 21474 ATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATG 21533 Query 7254 TCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTATGTT 7313 |||||| || |||||||||||| | ||| || | || || || ||| ||| Sbjct 21534 TCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTC 21593 Query 7314 CCATTATTCAAGGGATTGACAATGGCAGATGGATTA-ATGACAGTGGTGAAGAAAATGAT 7372 || | | ||||| ||||| |||||||| ||||| | || || | || || ||| | Sbjct 21594 CCTCTCTGTAAGGGGTTGACTATGGCAGA-CGATTACAACACTGTAATTAACAAGATGTT 21652 Query 7373 TGATTCATCATGCGGGCAAGGAAATCTAGATTACAACACTGTATCAATTGCCAATCATAT 7432 | | ||| || ||| | | ||| || || || | || ||||||||| | Sbjct 21653 GCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCATGT 21712 Query 7433 AGATTATACAAAGTGGAACAATCACCAGA-GAAGGAAGTCCAATCACCCTGTTTTTACTG 7491 ||| |||| ||||| |||||| | |||| ||| |||| | ||| |||| || || | | Sbjct 21713 AGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAG-CTAATGACCCAGTCTTCAGAG 21771 Query 7492 TGATGGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAGTTCTTCGAAA 7551 | ||||| | |||| | || ||| || || | ||||||||||||| || || | Sbjct 21772 TTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGAGA 21831 Query 7552 AA 7553 || Sbjct 21832 AA 21833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38333974114240