Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028234.1 Length=12162 Score E Sequences producing significant alignments: (Bits) Value seq4993 123 2e-24 >seq4993 Length=28616 Score = 123 bits (136), Expect = 2e-24 Identities = 251/368 (68%), Gaps = 16/368 (4%) Strand=Plus/Plus Query 7385 ATTGGATTAAAGGCCAAAGAAAGAGAACTGAAAAGGAAAGGTAGAtttttttCTCTAATG 7444 || || |||| || ||||||||||||||||| |||||||| ||| | ||||| Sbjct 21474 ATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATG 21533 Query 7445 ACTTGGAGATTGAGAGAATACTTTGTTGCAACTGAATTCCTGATTAAAAAACATTTTGTC 7504 |||||| ||| ||||||| |||| | || || | | ||||| || ||||||||| Sbjct 21534 TCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTC 21593 Query 7505 CCTCTATTTGAGGGACTAACTATGGCAGATGATTTGATCACAGTTGTGaaaaaaaTGATT 7564 ||||| | | |||| | ||||||||||| |||| | ||| || | || || ||| | Sbjct 21594 CCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAGATGTTG 21653 Query 7565 CGAAACTCAAATGGACAA------GGATTAAATGATTACAGTAGAATAACTATAGCAAAT 7618 | | ||| | |||||| ||| | |||| | | | |||||||| ||| Sbjct 21654 CAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCA------AGTTACTATAGCCAAT 21707 Query 7619 CATATTGATTATGAAAAGTGGAATAATCATCAAAGAAAGGAATCAAATAAATATGTTTTT 7678 ||| | || ||| ||||| || ||| |||| || || ||| | ||| | || || Sbjct 21708 CATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTC 21767 Query 7679 AAAGTTATGGGGC-AATTCTTAGGTTATCCTAATTTAAT-TGTCAGAACCCATGAGTTTT 7736 | ||||||||| | || | ||| | ||||| | |||| |||| |||||||||| Sbjct 21768 AGAGTTATGGGCCTGTTTGTCAGGAT-GGAGAATTTGTTCTGTC-GAACTCATGAGTTTT 21825 Query 7737 TTGAAAAA 7744 |||| ||| Sbjct 21826 TTGAGAAA 21833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38788198440360