Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq4993 107 2e-19 >seq4993 Length=28616 Score = 107 bits (118), Expect = 2e-19 Identities = 297/448 (66%), Gaps = 12/448 (3%) Strand=Plus/Plus Query 8188 TACAAAAGATAAATGATGAAGGGTTAGATTTGGATTCTCTAATTATTGGGTTAAAAGCCA 8247 |||||| | | ||||| || || | ||| || ||| | || ||||||| ||| | Sbjct 21430 TACAAAGGGTCAATGACGAGGGACTGTCTTTAAATGAGCTAGTCATCGGGTTAAGAGCAA 21489 Query 8248 AAGAAAGAGAAATGAAGAGAATTGGGAGAtttttttCATTAATGTCTTGGGAGTTGAGAG 8307 ||||||||||| ||||| | || ||||| ||| | |||||||||||| ||| ||| Sbjct 21490 AAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGGACTTTGCGAG 21549 Query 8308 AATATTTT-GTATATACAGAGTATTTAATAAAGGAGTATTTTGTTCCATTATTCCATGGC 8366 |||||||| |||| ||| ||| ||||| ||| || ||||||| || | | | || Sbjct 21550 AATATTTTGGTAT-TACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTCTCTGTAAGGGG 21608 Query 8367 TTGACCATGGCAGATGACCTGCAGGA-AGTTATTAAGAAAATGTTGGAGAATGTAAGTGG 8425 ||||| |||||||| || | || | || ||||| || |||||| | | | || Sbjct 21609 TTGACTATGGCAGACGA-TTACAACACTGTAATTAACAAGATGTTGCAAGCTTCAGAAGG 21667 Query 8426 ACAAGGGTTGGATAATTACGAGTATATATCAATTGCGAATCATATTGATTATGAAAAATG 8485 |||| | || | || || | | | || || |||||| | || ||| || || Sbjct 21668 ACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCATGTAGACTATAGTAAGTG 21727 Query 8486 GAACAATCATCAACGATACGAATCTAATTGTCATATTTTTAAAGTTATGGGTCAATGTTT 8545 |||||| |||| | | ||| ||||| | | || | ||||||||| | ||||| Sbjct 21728 AAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTATGGGCC--TGTTT 21785 Query 8546 TGGTC----TTCCCAATTTGTTTTTACGTTCTCATGAATTTTTTCAAAAAAGCCTGATTT 8601 ||| | |||||||| | || ||||||| |||||| | ||| | | | Sbjct 21786 --GTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGAGAAATCATTCTTCT 21843 Query 8602 ATTACAACCAACGACCTGATCTGATGAT 8629 | || | | |||||||||| ||||| Sbjct 21844 ACTATCGCGACAGACCTGATCTAATGAT 21871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41449569139880