Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028239.1 Length=16133 Score E Sequences producing significant alignments: (Bits) Value seq4993 111 2e-20 >seq4993 Length=28616 Score = 111 bits (122), Expect = 2e-20 Identities = 272/403 (67%), Gaps = 7/403 (2%) Strand=Plus/Plus Query 11295 TTAAG-GCTAAAGAGAGGGAATTGAAAGATGCTGGGAGGtttttttCATTAATGAGCTGG 11353 ||||| || ||||| || ||| |||| || || || || ||| | |||||| ||| Sbjct 21480 TTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGG 21539 Query 11354 GAGCTGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTTGTACCATTA 11413 || | || || || | |||| || ||||||| |||||||||| || | Sbjct 21540 ACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTCTC 21599 Query 11414 TTTAAGGGTCTGACTATGGCTGATGACTTACAA-ACAGTTATTAAGAAGATGATAGATGT 11472 | |||||| |||||||||| || || |||||| || || ||||| |||||| | | | Sbjct 21600 TGTAAGGGGTTGACTATGGCAGACGA-TTACAACACTGTAATTAACAAGATGTTGCAAGC 21658 Query 11473 GTCTTCTGGTCAAGGCACTG-AGACATATGAGAATATCACCATTGCAAATAACATAGATT 11531 || || ||| |||| | ||| |||||| | | || || || ||| | |||| | Sbjct 21659 TTCAGAAGGACAAAGCACGGGAGA-ATATGACCAAGTTACTATAGCCAATCATGTAGACT 21717 Query 11532 ATGAGAAATGGAATAATTATCAAAGGTATGAATCTAATCATGCAATATTCACAGTGATGG 11591 || || || || |||||||| ||| | ||| ||||| | || | |||| ||| |||| Sbjct 21718 ATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTATGG 21777 Query 11592 GGCAATTTTTAGGGTATCCAAAGTTAATTGCAA-GAACTCATGAGTTTTTTGAGAAAAGC 11650 | | ||| | || || | | || || ||||||||||||||||||||||| Sbjct 21778 GCCTGTTTGTCAGG-ATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGAGAAATCA 21836 Query 11651 CTAGTTTATTATAACCAAAGACCTGACTTAATGAGAGTAGTAG 11693 | | || ||| | | |||||||| |||||| | ||| || Sbjct 21837 TTCTTCTACTATCGCGACAGACCTGATCTAATGATAATAGAAG 21879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51486733855520