Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031236.1 Length=11165 Score E Sequences producing significant alignments: (Bits) Value seq4993 89.7 4e-14 >seq4993 Length=28616 Score = 89.7 bits (98), Expect = 4e-14 Identities = 275/417 (66%), Gaps = 15/417 (4%) Strand=Plus/Plus Query 6251 TTAAG-GCGAAAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGG 6309 ||||| || ||||| || ||||| || || |||||||| || | | |||||| Sbjct 21480 TTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATGTCTTGG 21539 Query 6310 GTACTTAGAGAGTATTTTGTCGTA--ACGGAATATCTTATAAAGATCCATTTCCTCCCTC 6367 |||| | ||| || || | ||| ||||| | || |||| ||||| |||||| Sbjct 21540 --ACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTCCCTC 21597 Query 6368 TTTTTAAGGGACTGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACA 6427 | | |||||| |||||||||| || || | | || | | || |||||| || | Sbjct 21598 TCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAGATGTTGCAAG 21657 Query 6428 CCTCCTCGGGTCAAGGGTTAAGTGGATACGACAAAATTAGTTATGCTAACCATTTGGATT 6487 | || || ||| | | | ||| ||| || ||| | || || ||| | || | Sbjct 21658 CTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCATGTAGACT 21717 Query 6488 ATGAGAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGG 6547 || ||||| ||||||||||| |||| || | || | || ||||||| ||| |||| Sbjct 21718 ATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGAGTTATGG 21777 Query 6548 GACAGTTTCTGGGGTATCCA-AATCTTATATATCGAACACATGAGTTCTTCCAGAAAAGC 6606 | | |||| | || || | ||| | | | |||||| |||||||| || |||| Sbjct 21778 GCCTGTTTGTCAGG-ATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGAGAA---- 21832 Query 6607 ATCATT-TACTACAAT---GATAGGCCGGATTTGATGGTAGTAGAGAACGGGATGAT 6659 |||||| | |||| || || || || ||| | ||| || |||| | ||| |||| Sbjct 21833 ATCATTCTTCTACTATCGCGACAGACCTGATCTAATGATAATAGAAGATGGGGTGAT 21889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35599031868940