Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq4993 132 4e-27 >seq4993 Length=28616 Score = 132 bits (146), Expect = 4e-27 Identities = 255/371 (69%), Gaps = 4/371 (1%) Strand=Plus/Plus Query 6441 TAGTGATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCTT 6500 |||| || || |||| || ||||||||||| ||||| | | || ||||| || || | Sbjct 21469 TAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCT 21528 Query 6501 TAATGTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCATT 6560 ||||||||||| | |||| ||||||| || || || |||||||| | |||| Sbjct 21529 TAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATT 21588 Query 6561 TTGTGCCTCTCTTTGACGGATTAACAATGGCTGATGATCTAACAACTGTTATCGGAAAGA 6620 |||| ||||||| | | || || || ||||| || ||| | ||||| || |||| Sbjct 21589 TTGTCCCTCTCTGTAAGGGGTTGACTATGGCAGACGATTACAACACTGTAATTAACAAGA 21648 Query 6621 TTTTGCGAAACACTGAAGGACAAGGAGAAGATGGATATGAAAGTGTCACCTTCGCAGATC 6680 | |||| | | ||||||||| | | | |||||| || || | || ||| Sbjct 21649 TGTTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATC 21708 Query 6681 ATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACTTTCA 6740 || |||| || || || |||||| ||||||| ||| || ||| | ||| |||| Sbjct 21709 ATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCA 21768 Query 6741 AAGTTATGGGACAATTT-TTAGGATACCCCAATTTAATTCAG-AGAACTCATGAAATATT 6798 ||||||||| | ||| | ||||| ||||| ||| | |||||||||| | || Sbjct 21769 GAGTTATGGGCCTGTTTGTCAGGAT-GGAGAATTT-GTTCTGTCGAACTCATGAGTTTTT 21826 Query 6799 TGAGAAATCAT 6809 ||||||||||| Sbjct 21827 TGAGAAATCAT 21837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36801766704300