Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031244.1 Length=12774 Score E Sequences producing significant alignments: (Bits) Value seq4232 141 8e-30 >seq4232 Length=50018 Score = 141 bits (156), Expect = 8e-30 Identities = 273/395 (69%), Gaps = 16/395 (4%) Strand=Plus/Minus Query 7465 TGGGCTAAGATCAGGTTTAAGAAAAACTTTGAGTTCAATTATTCCCCAGATCTCTCGGAA 7524 |||| || || ||||| |||| |||| | |||||||| ||||| ||||| || || Sbjct 11533 TGGGACAAAATTAGGTTCTCAAAAACCTTTAATTTCAATTACTCCCCTGATCTGTCAGAG 11474 Query 7525 ATAACTAAGGATTCATCATGTGCCCCCAATAGGAGTGCCTTGGCAACACAATATGATAGG 7584 |||||||||||||| ||||||| ||| || | ||||| || ||||||||| || Sbjct 11473 ATAACTAAGGATTCCGCATGTGCACCCTATCGATCTGCCTACAGCACGCAATATGATCGG 11414 Query 7585 TGTTCTTATCGATACCTCTACAATAAGAAACCACCCACACTT----AAGCCGGGAACAAA 7640 ||| | || || || || || ||||| | || ||| ||| || || | || Sbjct 11413 TGTGCATACCGTTATCTATATGATAAGCAGCCGCCCCATCTTGGTCAAAACGTTGAGAAG 11354 Query 7641 AATCGGATATCTGCGATCCATAGAGGCA-TACATTAAGGCTGAACCTGACCTGGTT--AG 7697 || || | || ||||| || ||| |||||| | | || | || || || Sbjct 11353 ----GGCTACACAAGGTCTATAGATGCTCTAC-TTAAGGGTCACCCGAATCTCCTTGCAG 11299 Query 7698 GACTTTAATTAAAGAGA-GAGAAGACGGAATCTACAGACAAGAGGATCATATCATTATCC 7756 | |||| || ||| | ||| | || ||||||| | ||||||||||||||| | | Sbjct 11298 AAGA--AATTGAA-AGACGTGAAAAAGGTATCTACAACCCAGAGGATCATATCATAGTGC 11242 Query 7757 AATGCGGTAAAGAATTAGAACTAAAGGAATCATCAGGGAGAGCATTCACAAAACAGACAA 7816 |||| ||||| || | || ||||||||| || || || |||||||| |||||||| | Sbjct 11241 AATGTGGTAAGGAGCTGGAGCTAAAGGAAGACTCCGGTAGGGCATTCACCAAACAGACTA 11182 Query 7817 GCAATCAGAGATATATCCAAGTGTCGCTTGAGCAA 7851 ||| ||| ||||| |||| || || ||||| ||| Sbjct 11181 GCACTCAAAGATACGTCCAGGTCTCTCTTGAACAA 11147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40745841310680