Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq4993 109 4e-20 >seq4993 Length=28616 Score = 109 bits (120), Expect = 4e-20 Identities = 269/401 (67%), Gaps = 8/401 (2%) Strand=Plus/Plus Query 7305 ATAGGCTTAAGAGAGAAAGAAAGAGAAATCAAGATCAATGGCCGATTCTTTTCTCTGATG 7364 || || ||||||| |||||||||||| | ||| | || |||||||| | | ||| Sbjct 21474 ATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGCCTTAATG 21533 Query 7365 TCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGATTAAAACCCATTTTGTT 7424 || ||| ||| ||||| ||||||| ||| |||||| | ||||| | |||||||| Sbjct 21534 TCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGTC 21593 Query 7425 CCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACA--GTAGTACGCAAGATGA 7482 || |||| | | || |||| ||||| || | || |||||| ||| | ||||||| Sbjct 21594 CCTCTCTGTAAGGGGTTGACTATGGCAGACG--ATTACAACACTGTAATTAACAAGATG- 21650 Query 7483 TGGAAAACACCAG-TGGACAGGGTTCTGATGATTATGAGCACATAGGAATTGCCAATCAC 7541 | | || | ||| ||||| | | | || ||||| || | || |||||||| Sbjct 21651 TTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCAT 21710 Query 7542 TTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAGAACCTGTATTCACA 7601 | || ||| ||||| || ||| | || || | || ||| || || || |||| | Sbjct 21711 GTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGA 21770 Query 7602 GTCATGGGCAAATTCCTC-GGATATCCGAATTTAATTGCGAGAACTCATGAGTTCTTCGA 7660 || |||||| || || |||| |||||| | ||||||||||||| || || Sbjct 21771 GTTATGGGCCTGTTTGTCAGGAT-GGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGA 21829 Query 7661 GAAAAGCTTCATTTACCACGGCGGTAGAGCAGACTTAATGA 7701 |||| ||| | ||| | ||| ||| | || |||||| Sbjct 21830 GAAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGA 21870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39060093283460