Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031310.1 Length=2111 Score E Sequences producing significant alignments: (Bits) Value seq19707 98.7 1e-17 seq24710 93.3 6e-16 seq10267 91.5 2e-15 >seq19707 Length=5155 Score = 98.7 bits (108), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 1007 TCTCAAAGCTGCCAAAGCGGTGGGCATTATCTTGAGCATTCTGATTGCACGGTTGCTGTA 1066 || || || ||||| ||||| || |||||||| | |||| | || | ||||| || Sbjct 4692 TCACAGAGTTGCCAGAGCGGGGGTCATTATCTAAATGATTCCAACTGTGCAGTTGCAGTG 4751 Query 1067 GTTGCTGCAGTGTGTGCAACCCGGAACATGACAGACCAGAAGACAAGGAACCAGATCATA 1126 || |||||||| ||||| || || || ||||| |||| || | || | || || || Sbjct 4752 GTGGCTGCAGTTTGTGCCACTCGTAATATGACTGACCCCAAAATCAGAGATCAAATTATT 4811 Query 1127 ACAAAGACATATAAGCAGTACATAGGGGCTAACAAGC-AGTTCTCTATGGAGATGTATGA 1185 || ||||| || |||||||| | | ||| ||||| | || || || || | || || Sbjct 4812 ACTAAGACGTACAAGCAGTATGTTGCTGCTGGCAAGCCATTTGACTCTG-AGGTATACGA 4870 Query 1186 GGCCCTATGTCAGTTTGCAACTGGTGGTGTTCCTGCTGATCACTCAGCAAA 1236 | | || ||| |||||||||||| || |||||||| || || || || Sbjct 4871 AGGATTGTGCAAGTATGCAACTGGTGGGGTACCTGCTGAGCATTCCGCCAA 4921 >seq24710 Length=3567 Score = 93.3 bits (102), Expect = 6e-16 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 1018 CCAAAGCGGTGGGCATTATCTTGAGCATTCTGATTGCACGGTTGCTGTAGTTGCTGCAGT 1077 ||| ||||| || |||||||| | |||| | || | ||||| || || |||||||| Sbjct 2500 CCAGAGCGGGGGTCATTATCTAAATGATTCCAACTGTGCAGTTGCAGTGGTGGCTGCAGT 2559 Query 1078 GTGTGCAACCCGGAACATGACAGACCAGAAGACAAGGAACCAGATCATAACAAAGACATA 1137 ||||| || || || ||||| |||| || | || | || || || || ||||| || Sbjct 2560 TTGTGCCACTCGTAATATGACTGACCCCAAAATCAGAGATCAAATTATTACTAAGACGTA 2619 Query 1138 TAAGCAGTACATAGGGGCTAACAAGC-AGTTCTCTATGGAGATGTATGAGGCCCTATGTC 1196 |||||||| | | ||| ||||| | || || || || | || || | | || Sbjct 2620 CAAGCAGTATGTTGCTGCTGGCAAGCCATTTGACTCTG-AGGTATACGAAGGATTGTGCA 2678 Query 1197 AGTTTGCAACTGGTGGTGTTCCTGCTGATCACTCAGCAAA 1236 ||| |||||||||||| || |||||||| || || || || Sbjct 2679 AGTATGCAACTGGTGGGGTACCTGCTGAGCATTCCGCCAA 2718 >seq10267 Length=800 Score = 91.5 bits (100), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 1007 TCTCAAAGCTGCCAAAGCGGTGGGCATTATCTTGAGCATTCTGATTGCACGGTTGCTGTA 1066 || || || ||||| ||||| || |||||||| | |||| | || | ||||| || Sbjct 219 TCACAGAGTTGCCAGAGCGGGGGTCATTATCTAAATGATTCCAACTGTGCAGTTGCAGTG 160 Query 1067 GTTGCTGCAGTGTGTGCAACCCGGAACATGACAGACCAGAAGACAAGGAACCAGATCATA 1126 || |||||||| ||||| || || || ||||| |||| || | || | || || || Sbjct 159 GTGGCTGCAGTTTGTGCCACTCGTAATATGACTGACCCCAAAATCAGAGATCAAATTATT 100 Query 1127 ACAAAGACATATAAGCAGTACATAGGGGCTAACAAGC-AGTTCTCTATGGAGATGTATGA 1185 || ||||| || ||||| || | | ||| ||||| | || || || || | || || Sbjct 99 ACTAAGACGTACAAGCAATATGTTGCTGCTGGCAAGCCATTTGACTCTG-AGGTATACGA 41 Query 1186 GGCCCTATGTCAGTTTGCAACTGGTGGTGTTCCTGCTGA 1224 | | || ||| |||||||||||| || |||||||| Sbjct 40 AGGATTGTGCAAGTATGCAACTGGTGGGGTACCTGCTGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6643973212430