Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031690.1 Length=11308 Score E Sequences producing significant alignments: (Bits) Value seq4993 102 6e-18 seq10207 96.9 2e-16 >seq4993 Length=28616 Score = 102 bits (112), Expect = 6e-18 Identities = 298/452 (66%), Gaps = 14/452 (3%) Strand=Plus/Minus Query 4476 GATCAGGTCTATCCAGGTAATATATCAGTGATTTTTCAAAGAATTCATGAGTTCGAGATA 4535 |||||||||| || | || || | | |||||| ||||| || |||||||||||| | | Sbjct 21864 GATCAGGTCTGTCGCGATAGTAGAAGAATGATTTCTCAAAAAACTCATGAGTTCGACAGA 21805 Query 4536 TTAGTTT-TGGATACCCAAGAAACTTTCCCATCACATCAAATACAGGATTATTGGCTT-- 4592 | || | || || | |||| ||||| || || || || | ||| |||| Sbjct 21804 ACAAATTCTCCAT-CCTGACAAACAGGCCCATAACTCTGAAGACTGGGTCATTAGCTTCT 21746 Query 4593 TGGCTCGTTGATGGTTATTCCATTTGCTATAATCAAAGTGATTGGCGATACAGATGTTCT 4652 | ||| |||| || || || || ||||| || | |||||||| ||| | | | Sbjct 21745 TTCCTC--TGATAATTGTTTCACTTACTATAGTCTACATGATTGGCTATAGTAACTTGGT 21688 Query 4653 CGTACCCTTCACTTCCTTGACCT---GAAGTTGTATCCATCATTTTCTTTATGACGGTAG 4709 | || || | | | ||| ||| |||| | | || ||| || || || || || Sbjct 21687 CATATTCTCCCGTGCTTTGTCCTTCTGAAGCT---TGCAACATCTTGTTAATTACAGTGT 21631 Query 4710 TCATATCATCTGCCATAGTTAGTCCTTTAAACAATGGAACAAAGTGAGTCTTGATTAGGT 4769 | ||| ||||||||||| | || ||| | | || ||||| || |||| |||| Sbjct 21630 TGTAATCGTCTGCCATAGTCAACCCCTTACAGAGAGGGACAAAATGCTTCTTAATTAACA 21571 Query 4770 GTTCTGTTATTACAAAATACTCTCGTAAAGCCCAGGTCAATAGAGCATAAAATCTTCCTC 4829 | || || || ||||||| ||||| |||| ||| | || || ||| | ||||| || Sbjct 21570 GCTCCGTAATACCAAAATATTCTCGCAAAGTCCAAGACATTAAGGCAAAGAATCTACCGA 21511 Query 4830 CAATCTTGATCTCTCGCTCTTTTCCTTTAAGTCCTATGATGAGATCCTCAAGAGTTAGTC 4889 ||| ||| | |||| |||||| || | | || |||| || || | | || |||| Sbjct 21510 CAAGCTTCAGTTCTCTTTCTTTTGCTCTTAACCCGATGACTAGCTCATTTAAAGACAGTC 21451 Query 4890 CATTGTCATTGACTTCTTGCAGGA--ACTTTT 4919 | | ||||||||| ||| |||| |||||| Sbjct 21450 CCTCGTCATTGACCCTTTGTAGGAATACTTTT 21419 >seq10207 Length=801 Score = 96.9 bits (106), Expect = 2e-16 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 4702 GACGGTAGTCATATCATCTGCCATAGTTAGTCCTTTAAACAATGGAACAAAGTGAGTCTT 4761 ||| ||| | ||||||||||||| ||||| ||||| |||| || | ||| || ||| Sbjct 526 GACAGTATTGTTATCATCTGCCATGGTTAGACCTTTGCACAAGGGGAAAAAATGGTGCTT 585 Query 4762 GATTAGGTGTTCTGTTATTACAAAATACTCTCGTAAAGCCCAGGTCAATAGAGCATAAAA 4821 || || | ||||| || ||||| ||||||| ||| ||||||| || |||||| |||| Sbjct 586 AATCAGTAGCTCTGTGATAACAAAGTACTCTCTTAATGCCCAGGACATGAGAGCAAAAAA 645 Query 4822 TCTTCCTCCAATCTTGATCTCTCGCTCTTTTCCTTTAAGTCCTATGATGAGATCCTCAAG 4881 | ||| | | || | ||||| | ||||| | |||||||| | | || | || Sbjct 646 CCGTCCGACTAGTTTTAGCTCTCTCGCTTTTAGTCGTAGTCCTATTACCAACTCGTTCAG 705 Query 4882 AGTTAGTCCATTGTCATTGACTTCTTGCAGGAA 4914 | ||||| | ||||| || ||| ||||| Sbjct 706 TGCGAGTCCTTCATCATTTACCCGTTGGAGGAA 738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36056454957920