Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq10207 104 2e-18 seq4993 78.8 7e-11 >seq10207 Length=801 Score = 104 bits (114), Expect = 2e-18 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 4681 ATCTGCCATGGTTAGACCTTTAAATAATGGGACAAAATGCTTCTTGATCAGATATTCTGT 4740 ||||||||||||||||||||| | || |||| |||||| | ||| ||||| ||||| Sbjct 541 ATCTGCCATGGTTAGACCTTTGCACAAGGGGAAAAAATGGTGCTTAATCAGTAGCTCTGT 600 Query 4741 TATTACGAAGTATTCTCTCAACTCCCAGGACATGAGCGCAAAAAATCTTCCTTTTATTTT 4800 || || ||||| ||||| || ||||||||||||| |||||||| | ||| || ||| Sbjct 601 GATAACAAAGTACTCTCTTAATGCCCAGGACATGAGAGCAAAAAACCGTCCGACTAGTTT 660 Query 4801 CAGTTCACGCTCTTT 4815 || || | | |||| Sbjct 661 TAGCTCTCTCGCTTT 675 >seq4993 Length=28616 Score = 78.8 bits (86), Expect = 7e-11 Identities = 224/343 (65%), Gaps = 6/343 (2%) Strand=Plus/Minus Query 4526 CCCATTACCTTGAATGTGGGATTATTGGCTGCTCCCCTCTGATGATTGTTCCATTTTTCA 4585 ||||| || |||| || | ||| ||| || |||||||| |||||| || || | Sbjct 21778 CCCATAACTCTGAAGACTGGGTCATTAGCTTCTTTCCTCTGATAATTGTTTCACTTACTA 21719 Query 4586 TAATCTACATGGTTGGCAAAGCTTACATGATCATAATTATCCGTACCTTGACCATATGTG 4645 || |||||||| ||||| | | || || ||||| | |||| | ||| || | || Sbjct 21718 TAGTCTACATGATTGGCTATAGTAACTTGGTCATATTCTCCCGTGCTTTGTCCTTCTGAA 21659 Query 4646 TTGTCCATTAATTTTTTAGTCAAAACGGTGGAGTTATCTGCCATGGTTAGACCTTTAAAT 4705 | || | || ||| | | | | || | | |||||||| || | || ||| | Sbjct 21658 GCTTGCAACATCTTGTTAATTACAGTGTTGTAATCGTCTGCCATAGTCAACCCCTTACAG 21599 Query 4706 AATGGGACAAAATGCTTCTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAACTCC 4765 | ||||||||||||||||| || | || || || | || ||||||| ||| | Sbjct 21598 AGAGGGACAAAATGCTTCTTAATTAACAGCTCCGTAATACCAAAATATTCTCGCAAAGTC 21539 Query 4766 CAGGACATGAGCGCAAAAAATCTTCCTTTTATTTTCAGTTCACGCTCTTTGCCTTTAAGT 4825 || ||||| | ||||| ||||| || | |||||||| | ||||| || | | Sbjct 21538 CAAGACATTAAGGCAAAGAATCTACCGACAAGCTTCAGTTCTCTTTCTTTTGCTCTTAAC 21479 Query 4826 CCGATAAGAAGTTTCTCCTT---ATCCAGCCCCTGGTCATTGA 4865 ||||| | || ||| || | ||| |||| |||||||| Sbjct 21478 CCGATGACTAG---CTCATTTAAAGACAGTCCCTCGTCATTGA 21439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35832541557720