Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_007020.1 Length=11440 Score E Sequences producing significant alignments: (Bits) Value seq313 87.8 1e-13 >seq313 Length=5067560 Score = 87.8 bits (96), Expect = 1e-13 Identities = 387/597 (65%), Gaps = 32/597 (5%) Strand=Plus/Minus Query 6586 ATAGGTCTAAGACCAAAAGAGAGAGAACTGAAGAGAGCTGGTAGGTTTTTTGCCCTGATG 6645 ||||| ||| ||||||||| |||||| || || || || | |||||||| || ||| Sbjct 3837896 ATAGGACTACGACCAAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCATG 3837837 Query 6646 AGTTGGGAGCTCAGAGAGTACTTCGTTTTTACTGAGTATCTGATTAAGGAACATTTCATT 6705 |||| | ||||||||||| ||| | || ||| ||||||||| ||||| || Sbjct 3837836 TCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATTTTTTT 3837777 Query 6706 CCTCTTTTTAAGGGGTTGACGATGGCCGATGATATGACCGGAGTCATCAAGAAACTGCTA 6765 || | | || || |||||||||| ||||||| | ||| | || | | Sbjct 3837776 CCCTTGTGCAAAGGTCTGACGATGGCAGATGATAACAATACTGTCGTAAATA-------A 3837724 Query 6766 GAGTGCTCCAACGGCCACGGAGAAACAGATTACTCA--AATA--------TAACCATATC 6815 || |||| ||| ||| |||| | | | ||||| ||| | ||||| | Sbjct 3837723 GA-TGCTTCAA--GCCTCGGAATATAAAAGCACTCATGGATATGATCAAGTTACCATTGC 3837667 Query 6816 AAATCACTTAGATTACTCGAAATGGAACAATCATCAAAGATATGAATCCAACAAATATGT 6875 || || | |||||| | |||||||||||| | || || | ||| | || | ||| Sbjct 3837666 TAAACATGTCGATTACACTAAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGT 3837607 Query 6876 ATTCCAAGTGATGGGATCCTTTTTAGGATATCCA-AATCTTATCTCTCGCACCCACGAAT 6934 |||| || ||||| ||| | ||| || | || || | | ||| ||||| || | Sbjct 3837606 TTTCCGTGTAATGGGCAATTTTATGGGA-ATGGAGAACCTGTTTTGTCGTACCCATGAGT 3837548 Query 6935 TTTTCCAAAAATCCTTGATATATTTCATAAATAGGCCAGATTTAATGGTCGTAAAAG--G 6992 | || ||| ||||| | |||| | | || ||| || | ||| | ||| ||| | Sbjct 3837547 TCTTTGAAAGTTCCTTCTTTTATTATAAAGATCAGCCTAATCTGATGATAGTAGAAGATG 3837488 Query 6993 GAACACATTGGAGCCTAAGGGTCAGATGAGGGTATGCTGGAACGGGCAAGCCGGGGGCCT 7052 | | | ||| | ||| |||| || || ||| | || || || || || Sbjct 3837487 GGA-AGATTAAGAACAGAGGTGAAGAT-CTTGTGTGTTGGCAAGGTCAGGCAGGCGGATG 3837430 Query 7053 CGAAGGTCTTCGTCAAAAAGGGTGGAGTATTGTAAATC-TCTTGCTC-ATCATGAGGGTT 7110 ||| ||||||| || ||||| |||||| |||| |||| ||||||| | | | | | | Sbjct 3837429 CGAGGGTCTTCAACAGAAAGGTTGGAGTGTTGTCAATCACCTTGCTCTACTACGTGAG-T 3837371 Query 7111 GGAAAGCTCAGGAACACCGAGATCAAAATACTGGCT-CAGGGTGACAATCAGGTTAT 7166 |||| ||| | || || |||| | ||||| | | ||||| |||||||| ||||| Sbjct 3837370 CGAAATCTC-GAAATACAAGGATC-AGATACTTGATGCAGGGGGACAATCAAGTTAT 3837316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36492280251296