Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq313 122 6e-24 >seq313 Length=5067560 Score = 122 bits (134), Expect = 6e-24 Identities = 344/516 (67%), Gaps = 18/516 (3%) Strand=Plus/Minus Query 6302 TAATAGGACTAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGA 6361 ||||||||||| | |||| ||||| | ||| | | |||| |||| ||| | || | Sbjct 3837898 TAATAGGACTACGACCAAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCA 3837839 Query 6362 TGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAG-TACTTAATAAAGACTCATTAT 6420 |||||||| | | ||||| || ||||| ||||| ||| ||| | || ||| |||| | Sbjct 3837838 TGTCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTAC-TGATTAAGCGCCATTTT 3837780 Query 6421 GTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAGATG 6480 | || || | |||||| || || ||||| |||||| | | || ||||| |||||| Sbjct 3837779 TTTCCCTTGTGCAAAGGTCTGACGATGGCAGATGATAACAATACTGTCGTAAATAAGATG 3837720 Query 6481 TTGGACAACAC-GAATGGACAAGGACTGGATGATTATTCATCGA-TTTGCATCGCCAATC 6538 | | | | |||| | ||| ||| ||| || | ||| | || ||| || || | Sbjct 3837719 CTTCAAGCCTCGGAATATAAAAGCACT-CATGGATA-TGATCAAGTTACCATTGCTAAAC 3837662 Query 6539 ACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGTTTC 6598 | |||| || || ||||| ||| | ||||| |||||| | |||| ||||| || | Sbjct 3837661 ATGTCGATTACACTAAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGTTTTCC 3837602 Query 6599 GAGTCATGGGGCAGTTTTTGGGTTATCCCAGA--TTGTTTGAAAGAACCCATGAGTTTTT 6656 | || ||||| | ||| |||| | ||| ||||| | ||||||||||| || Sbjct 3837601 GTGTAATGGGCAATTTTATGGG--AATGGAGAACCTGTTTTGTCGTACCCATGAGTTCTT 3837544 Query 6657 TGAATCAAGCCTCATTTACTACAACGGCAGACCAGACTTGATGGATG-TAAGAGGAGATT 6715 |||| | || |||| || || ||| ||| || |||| || || |||| Sbjct 3837543 TGAAAGTTCCTTCTTTTATTATAA----AGATCAGCCTAATCTGATGATAGTAGAAGATG 3837488 Query 6716 CGTTGATCAATACCA---CTGAAAAGTTGGTGTGTTGGGAGGGTCAGGCGGGAGGATTGG 6772 | ||| || | || |||| | | ||||||||| | |||||||| || |||| | Sbjct 3837487 GGAAGATTAAGAACAGAGGTGAAGATCTTGTGTGTTGGCAAGGTCAGGCAGGCGGATGCG 3837428 Query 6773 AAGGATTGAGACAAAAAGGATGGAGTGTGCTGAATC 6808 | || | ||| ||||| |||||||| | |||| Sbjct 3837427 AGGGTCTTCAACAGAAAGGTTGGAGTGTTGTCAATC 3837392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35394695883864