Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq313 104 2e-18 >seq313 Length=5067560 Score = 104 bits (114), Expect = 2e-18 Identities = 212/307 (69%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 6307 AAAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCACTGATGTCTTGGCAGTTGAG 6366 ||||| ||||||| |||| | | |||| | || ||| | || ||||| ||| || || Sbjct 3837882 AAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCATGTCCTGGGCATTAAG 3837823 Query 6367 AGAGTACTTTGTGATAACGGAATATCTGATTAAGACCCATTATGTTCCACTATTTAAAGG 6426 |||||||||||| || || || ||||||||| ||||| | |||| | | ||||| Sbjct 3837822 AGAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATTTTTTTCCCTTGTGCAAAGG 3837763 Query 6427 ATTGACTATGGCAGATGACCTCACATCAGTCGTGAAGAAGATGTTGGACAACAC-AAACG 6485 |||| ||||||||||| || | ||||| || |||||| | | | | || Sbjct 3837762 TCTGACGATGGCAGATGATAACAATACTGTCGTAAATAAGATGCTTCAAGCCTCGGAATA 3837703 Query 6486 GACAAGGATTAGACGACTATTCATCGA-TTTGTATAGCGAATCACATTGATTACGAAAAA 6544 | ||| | | | | || | ||| | || || || || || | |||||| ||| Sbjct 3837702 TAAAAGCACT-CATGGATA-TGATCAAGTTACCATTGCTAAACATGTCGATTACACTAAA 3837645 Query 6545 TGGAACAATCATCAGAGGAAAGAGTCAAATGGACCGGTCTTTCGCGTCATGGGACAATTT 6604 ||||||||| | ||||||||||| | |||| || || || || || ||||| |||||| Sbjct 3837644 TGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGTTTTCCGTGTAATGGG-CAATTT 3837586 Query 6605 T-TGGGA 6610 | ||||| Sbjct 3837585 TATGGGA 3837579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35346696567504