Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_025378.1 Length=11202 Score E Sequences producing significant alignments: (Bits) Value seq313 114 9e-22 >seq313 Length=5067560 Score = 114 bits (126), Expect = 9e-22 Identities = 266/395 (67%), Gaps = 16/395 (4%) Strand=Plus/Minus Query 6353 AAAGAGAGAGAATTAAAATTGATTGGGCGTTTCTTTTCTCTCATGTCTTGGAAATTGAGA 6412 |||| |||||| ||||| | | || || || ||| |||||||||| ||| ||| ||| Sbjct 3837881 AAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCATGTCCTGGGCATTAAGA 3837822 Query 6413 GAATACTTCGTCATAACCGAGCACCTAATTAAGACTCACTTTGTCCCTCTGTTCCACGGA 6472 || ||||| || || || |||| || |||||| || ||| | || ||| | | || Sbjct 3837821 GAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATTTTTTTCCCTTGTGCAAAGGT 3837762 Query 6473 CTTACGATGGCAGATGATCTCACATCAGTGATCAAGAAGATGATGGACAGTTCCTCGG-- 6530 || ||||||||||||||| || | || | || |||||| | | || |||||| Sbjct 3837761 CTGACGATGGCAGATGATAACAATACTGTCGTAAATAAGATGCTTCA-AG--CCTCGGAA 3837705 Query 6531 --GGCAGGGGTTGACAGAT-TACTCAGCTGTATGCATAGCCAATCATATCGACTACGAAA 6587 | | | | ||| | ||| || ||| || || ||| |||| ||| | Sbjct 3837704 TATAAAAGCACTCATGGATATGATCA--AGTTACCATTGCTAAACATGTCGATTACACTA 3837647 Query 6588 AATGGAACAATCACCAGCGGAAAGAATCCAATGGGCCGGTATTCCGAGTAATGGGCCAAT 6647 ||||||||||| ||||| |||||||| | |||| || || ||||| ||||||||| | | Sbjct 3837646 AATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGTTTTCCGTGTAATGGGCAATT 3837587 Query 6648 TCTTGGGCTTCCCCAATCTGATATCCAGAACGCACGAATTCTTTGAGAAAAGT---TTGG 6704 | |||| | || ||| | | | || || || ||||||| ||||| || Sbjct 3837586 TTATGGGAATGGAGAACCTGTTTTGTCGTACCCATGAGTTCTTTG---AAAGTTCCTTCT 3837530 Query 6705 TTTATTACAATGGCCGGCCAGATTTGATGAGAGTA 6739 ||||||| || | | ||| || |||||| |||| Sbjct 3837529 TTTATTATAAAGATCAGCCTAATCTGATGATAGTA 3837495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35730691098384