Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq313 132 3e-27 >seq313 Length=5067560 Score = 132 bits (146), Expect = 3e-27 Identities = 432/652 (66%), Gaps = 52/652 (8%) Strand=Plus/Minus Query 6272 AAAGGATAGATGAAGAAGGTCTA--AATGAA-GAGGCTTTAGTCATAGGATTAAAAGGTA 6328 || || || |||| ||||| || | |||| ||| || || |||||| || | | Sbjct 3837937 AACGGGTAAATGATGAAGGACTCGCACTGAACGAG---TTGGTAATAGGACTACGACCAA 3837881 Query 6329 AGGAAAGAGAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAG 6388 | | |||||||| |||| || || |||| ||| | | ||||| |||| ||| ||| Sbjct 3837880 AAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCATGTCCTGGGCATTAAGAG 3837821 Query 6389 AGTACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTTAAGGGAT 6448 |||||||||| || || || | || || | ||||||| | || | | || || Sbjct 3837820 AGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATTTTTTTCCCTTGTGCAAAGGTC 3837761 Query 6449 TAACAATGGCAGATGATATGACAGAAGTGA--TCAAAAAGATGCTGGAAA-----GAAGT 6501 | || ||||||||||||| ||| | || | || |||||||| || ||| Sbjct 3837760 TGACGATGGCAGATGATA--ACAATACTGTCGTAAATAAGATGCTTCAAGCCTCGGAATA 3837703 Query 6502 CAAGGCCAAGGAGAATTAGACTATCAACATGTGAGCATAGCGAACCATATAGATTATGAA 6561 || ||| | | || ||| | || || | ||| || || ||| | ||||| Sbjct 3837702 TAA----AAGCACTCATGGA-TATGATCAAGTTACCATTGCTAAACATGTCGATTACACT 3837648 Query 6562 AAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGCCAA 6621 || ||||||||| | || ||||||||| | |||| || ||||||||||| |||||| | Sbjct 3837647 AAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGTTTTCCGTGTAATGGGCAAT 3837588 Query 6622 TTCTTGGGCT-----ATCCATCTTTGATAGAGAGAACGCATGAGTTCTTTGAGAAAAGT- 6675 || |||| | || |||| | || |||||||||||||| |||| Sbjct 3837587 TTTATGGGAATGGAGAACCTGTTTTGTC-----GTACCCATGAGTTCTTTGA---AAGTT 3837536 Query 6676 -CTTGTTT-ATTACAATGGTAGACCAGACT----TGATGAAGGTAGAAAATGGTGTAGTA 6729 ||| ||| |||| || ||| ||| || |||||| |||||| |||| | || | Sbjct 3837535 CCTTCTTTTATTATAA----AGATCAGCCTAATCTGATGATAGTAGAAGATGG-GAAG-A 3837482 Query 6730 TT--GAATAAAACAGATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGAC 6787 || ||| | | || || | || || ||| | ||||| ||||| || | ||||| | Sbjct 3837481 TTAAGAACAGAGGTGAAGATCTTGTGTGTTGGCAAGGTCAGGCAGGCGGATGCGAGGGTC 3837422 Query 6788 TGAGACAAAAAGGTTGGAGTATACTCAA-CTTGTTGGTGATTAGACGTGAGTCCAAAATC 6846 | ||| |||||||||||| | |||| | ||| | | ||||||||| ||| Sbjct 3837421 TTCAACAGAAAGGTTGGAGTGTTGTCAATCACCTTGCT-CTACTACGTGAGTCGAAATCT 3837363 Query 6847 CGCAATACAAGGGTTCAGACA-TTAGCACAGGGAGACAATCAAGTGATCTGT 6897 || ||||||| || ||||| | || ||||| ||||||||||| |||||| Sbjct 3837362 CGAAATACAA-GGATCAGATACTTGATGCAGGGGGACAATCAAGTTATCTGT 3837312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35535493878520