Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_028232.1 Length=11214 Score E Sequences producing significant alignments: (Bits) Value seq313 98.7 7e-17 >seq313 Length=5067560 Score = 98.7 bits (108), Expect = 7e-17 Identities = 259/388 (67%), Gaps = 12/388 (3%) Strand=Plus/Minus Query 6378 GTTGTTAATTGGACTCAAAGCAAAAGAAAGAGAGCTAAAAATTATCGGGAGGTATTTCGC 6437 |||| |||| ||||| | |||||| |||||||||||| | |||| | | ||| || Sbjct 3837903 GTTGGTAATAGGACTACGACCAAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGC 3837844 Query 6438 TCTCTTGTCATGGAAGTTGAGAGAATATTTTGTGATAACAGAGTATTTGATCAAGACTAA 6497 |||| |||| ||| || ||||| || ||||| || |||||| |||| ||| | Sbjct 3837843 TCTCATGTCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCA 3837784 Query 6498 TTTCATTCACTTGTATGATGGTCTGACAATGGCAGATGATTTAAAAGGGGTCATGATGAA 6557 ||| ||| ||||| | |||||||| |||||||||||| || ||| | | || Sbjct 3837783 TTTTTTTCCCTTGTGCAAAGGTCTGACGATGGCAGATGATAACAATACTGTCGTAAATAA 3837724 Query 6558 ATTGC-TCAGTAG-GTCTGACGGTCAAGGGACATCA--GATTACAGTAGCA--TAACCAT 6611 ||| ||| || || || | || | || ||| ||| | | || | ||||| Sbjct 3837723 GATGCTTCA--AGCCTCGGAATATAAAAGCAC-TCATGGAT---ATGATCAAGTTACCAT 3837670 Query 6612 TGCCAACCACATTGACTATTCTAAGTGGAACAATCATCAAAGAAAAGAATCAAACAAATA 6671 ||| || || | || || |||| ||||||||| | || || |||||| | || | Sbjct 3837669 TGCTAAACATGTCGATTACACTAAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCC 3837610 Query 6672 TGTCTTCCGAGTGATGGGTCAGTTCATGGGATATCCGAATTTGTTCGAAAGGACACACGA 6731 ||| ||||| || ||||| | || |||||| ||| |||| | || || || Sbjct 3837609 TGTTTTCCGTGTAATGGGCAATTTTATGGGAATGGAGAACCTGTTTTGTCGTACCCATGA 3837550 Query 6732 GTTTTTTGAAAAGAGCTTGATTTATTAT 6759 ||| ||||||| ||| |||||||| Sbjct 3837549 GTTCTTTGAAAGTTCCTTCTTTTATTAT 3837522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35769090551472